Transcript | Ll_transcript_177452 |
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CDS coordinates | 3289-4263 (+) |
Peptide sequence | MDGANNISVQYTQGSADGVPAEDKEDGKTDSSREKTDDVASETKAVEPEPLVYVNKMGAKDAFKALLESVNVGSDWTWDRTMRVIINDKRYGALKTLGERKQAFNEYLNQRKKQEVEEKRMKQKKAREDFKKMLEESTELTSSTRWSKAVPIFENDERFKAVERDRDRRDMYDSFMEDLGNKERARAQVERKQNLMEFRMFLESCDFIKASTQWRKVQDRLEADERCSRLQKIDRLEIFQDYLLDLAKEEEEQKKIQKEELRKTERKNRDEFRKLMEEHIAAGVLTAKTNWRDYHSKVNCPYLWSFIFIFLFLFSVKNFNFLLS* |
ORF Type | complete |
Blastp | Pre-mRNA-processing protein 40A from Arabidopsis with 58.9% of identity |
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Blastx | Pre-mRNA-processing protein 40A from Arabidopsis with 50.33% of identity |
Eggnog | PRP40 pre-mRNA processing factor 40 homolog(COG5104) |
Kegg | Link to kegg annotations (AT1G44910) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428120.1) |
Pfam | FF domain (PF01846.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer