Transcript | Ll_transcript_179608 |
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CDS coordinates | 203-2947 (+) |
Peptide sequence | MAVETNDKTSLPLDFGDDDGPVTFKRYTSSKKKQLQSELTKSTSNSLDGQSNRQSSNVPSSNGQSSSTPKGDVVPSAKASAVKSPVGNSKASNSLVNPASVKLPVANSRSHSLNDKPKSVPEQKASIDIKEESKFIKHCTKDYAEDSEDEEDNKPLSARLKVNSNIDNKATPVVVKKSYEDSDDDDDIPLSAKLFRNSNVGTSSGNYDDPDEKKPISKVQKERQNGSSASNKQGKPSTVPAKRPLDKSNSVHSPVKKSKVSDPAASIKTKQVSLKCEPKVDDDDDDDIPISQRIKKSATSADKSSSINKKAATSADKSSSIKKNLAKVTKVNKAGKTSFKKQPKKLKKSGKGSDYSKSMKFLPGSGDGQKKWTTLVHNGVIFPPLYQPHGVKMLYKGKPVDLTPDQEEVATMYAVMRDTDYMQKDKFKENFWNDWRKLLGRNHVIHNLKDCDFTPIYDWHQSEKEKKKQITTEEKKALKEEKMKQEEKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRICPRDIVINIGKDAPVPECPIPGERWKEIRHDNTVTWLAYWSDPINPKLFKYVFLAASSSLKGQSDKEKYEKARMLKDYIENIRAAYTKDFTNKDITKQQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTREAPNKLKFNFLGKDSIKYENTVEVELPVYNAILKFQKEKGPGDDLFDMLDTSKLNAHLKELMPGLTAKVFRTFNASITLDDMLNKGTKGGDVGEKIVVYQHANKQVAIICNHQRSVSKSHSAQMSKLNEKIDELKAVLKELKTDLDRAKKGKSPLKSSDGKTKRNLNPEALEKKISQTNAKIEKMQRDMMTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLEKFSWAMDVDPDFRF* |
ORF Type | complete |
Blastp | DNA topoisomerase 1 alpha from Arabidopsis with 63.83% of identity |
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Blastx | DNA topoisomerase 1 beta from Arabidopsis with 78.51% of identity |
Eggnog | Dna topoisomerase(COG3569) |
Kegg | Link to kegg annotations (AT5G55300) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413101.1) |
Pfam | Eukaryotic DNA topoisomerase I, DNA binding fragment (PF02919.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer