Transcript | Ll_transcript_34781 |
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CDS coordinates | 86-6001 (+) |
Peptide sequence | MISFSIIASKQIRFLLNSLNEVNFHSVFHQLIQFAEFGTVGSILLLRICLDHFNIARRDMKDMQPERILGDVVKYLLEKPNFNAVFSESMKNVEINESFLESFCNGLKLSLMEKIAVSLSLSDSENPDARVCGKNFCMAQIEEVVANPGSLNCHELIHDIIMFLKQSEGLSKYVDSFMQILSLVEFKDMPSFVLNPLLPDEMREAEFLRNLELFHESGENDFDAMLADIQKEMNMGEIVNELGYGCTVDVSQCKEIFSLFTPLTDTTLSKLLGSIARTHAGLEDNQSTFLTFGTALGYNNLSELQPLNSWNIDVLIDTINQLAPQTNWIQVIEKLDHEGFLLPSEEAFSFLMSVYNHACKEPFPLHAICGSVWKNTEGQLSFLKYAVSAPPEVFTFAHSARQLAYIDVVNGSKLQTGHSNHAWACLDLLDVLCQLAERGHANSVRPIFEYPLKQCPEVLLLGMAHINTAYSLVQHEVCLTVFPMILKSTDGSGMILHLWHVNPNLVLRGVMDSQNDDLDNVTRIVDICQELKILSSVVEIIPSYYGIRLAAVAGRKEYLDLEKWLDTNLTTYKDFFFEECLKFLKDVHLTGSQDLSGKSFHQSGAFLNLYAETTATFLKVLKSHTDLVTSTQLPDELERLHISIVDSSPRLQNGGTTDSSASDGYADDIEAEANSYFHQMFSDSLSMNEMVHMLSRFKESSVKREKSIFECMIANLFEEYRFFQKYPERQLRIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPTDSKMFMFGSMALEQFVDRLIEWPQYCNHILQISHLRNTHSEIVGFIEQALARISSGHVDVDGMSYASGISSHNSAPATLGHVEPNASSIIQTGQQHMSLQLQQRRDIPLDDRYRASVGFDSSTDVKPLLSSAGQSSVVTPPDASNTNKLHSTFSSSSMLASSGFVRPSRGATSTRFGSALNIETLVAAAEKRETPIEAPGSEVQDKISFIINNISVANIETKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLSVDLKDVTPTSLLKDRKRAIEGNPDFSNKDVGVSQAQVISDIKSGPVPPVNQVDLPPEVTNLSNTGGHPHMLSQYAGPLHISMGTLMEEEKVTPPGLSDQLPSAQGLLQASPTPPHFSISQIPTQIPNIGTHVIINQKLSSFGLQMHFQRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYSMESDETRILNAAHLMVASLAGSLAHVTCKEPLRASISSQLRTSLQNLSIGNEILEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTDIGQQLSLRRKHREGMGSTFFDSNLYTQGSVGGVPDYLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSNSMSAVQSGNADLSGTSGSVSMGYDGVSRQVDDMAESNLASQFSASSIHSRTADSSSQLSLEKDSVASFPSTASTPDLQAVDSSEAVKESGASSQPQVSSGAVERFGTSFLESSLTTRDALDKYQIVVQKLEALVNNDSREAEIQGVISEVPEILLRCVSRDETALAVAQKVFKGLYDNASNSIHVGAHLGILTAIRDVCKLAVKELTSWVIYSEEERKFNKDITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVIEEPKVISELHNLVDALAKLATKPGSPESLPQLVEMVKNPTASAAALSAGNAGKDDKARQSRDNKGPGLLVANKEELTSVESVEPDPAGFRDQVSMSFAEWYRICELPGANDTASSHFILQLHQNGLLKGDDLTDRFFQLLMELAVTHCLSTEVINSGGLQSPQQLQPMSFLAIDVYAKLVFSILKGSSKLFLLSKIL |
ORF Type | 3prime_partial |
Blastp | CCR4-NOT transcription complex subunit 1 from Danio with 28.52% of identity |
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Blastx | CCR4-NOT transcription complex subunit 1 from Danio with 28.56% of identity |
Eggnog | Ccr4-NOT transcription complex, subunit(COG5103) |
Kegg | Link to kegg annotations (448949) |
CantataDB | Link to cantataDB annotations (CNT0002916) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463582.1) |
Pfam | CCR4-NOT transcription complex subunit 1 HEAT repeat (PF16418.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer