Transcript | Ll_transcript_34773 |
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CDS coordinates | 334-3006 (+) |
Peptide sequence | MELFHVGGDNDFDAILADIQKEMNMGEIVNELGYGCTVDVSQCKEIFSLFTPLTDNTLSKLLGSIARTHAGLEDNQSTFLTFGAALGYNLPELPPLNSWKIDVLIDTIKQLAPQTNWVQVFENLDHEGFFLPNEEAFSFLMSVYKHVCKEPFPLHAICGSVWKNTEGQLSFLKFAVSAPPEVFTFVHSARQLAFIDVVNGYKFQNGHSNHAWLCLDLLDVLCQLGERGHASSVRPVFEYPLKQCPEILLLGVAHINTAYSLFQREVCQIVFPMIVKRAGGSEMILHLWHVNPNLVLRGVMDSQKNDIDILTRIVDICQELKILSSVVEIIPSFYGIRLAAVSGRKEYLDLEKWLNNNLTTYKDVFFEECLKFLKDVHLTGAQDLSGKSFHQSGAVLNLYAESTATFLKVLKSHADLVTSRQLSEDLKRLHIFIDSNPRLQNGGTTDSSASDGYADDIEAEANSYFHQMFSDSLSMSEMVEMLARLKESSVKREKSIFECMIANLFEEYRFFQKYPERQLRIAALLFGSVIKHQLVTHISLGIALRYVLDALRKPTDSKMFMFGSMALEQFVDRLPEWPQYCNHILQISHLRITHLEVVGFIEETLARISSGHSDGEGVSLASGISSHNSAPATLGHVEFNASSITQPGQQHMPLQLQQRRDIPLDHRYKASVGLGSSTDVKPLLSSLGQSSVVTPPDASNTNKLHSTVSASSMLASGFARPSRGATSARFGSALNIETLVAAAEKRETPIEAPGSEVQDKISFIINNISVSNIDTKAKEFTEIMKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVKTTYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL |
ORF Type | 3prime_partial |
Blastp | CCR4-NOT transcription complex subunit 1 from Mus with 29.77% of identity |
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Blastx | CCR4-NOT transcription complex subunit 1 from Mus with 29.77% of identity |
Eggnog | Ccr4-NOT transcription complex, subunit(COG5103) |
Kegg | Link to kegg annotations (234594) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433885.1) |
Pfam | CCR4-NOT transcription complex subunit 1 HEAT repeat (PF16418.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer