Transcript | Ll_transcript_52111 |
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CDS coordinates | 3-5702 (+) |
Peptide sequence | TEEEAELQEHDDDDEEEEEELVGKVNKLMDKITASVDNPKPTVLHALASILENQESRYMEENDHFSTNNGRAAHNIGRLGSVIRENDEFFELISSKFLSETRYSTSVQVASARLLLSCSLSWIYPHVFEEPVIENIRNWVMDDNARVSAEDQSMKHHPRKTEVSDSEMLKTYSTGLLAVCLIGGGQVVEDVLTSGLPAKLMRYLRLRVLGETSSTQKDIGHSTESRNASGNNSLRGRDDGRSRFRQLPESSHLDDTRMTDEKSLEDQILERGPDRNIGEQNCQDNSWVGGEPPDGLGEDGDICDVDADGEDRWHSRDTHDGRIKYGEHDDNVNDSSRRRSKWGRSRGKARVNESTVESETVLLSPGSGNRLGQGRSAQDRSILRNAGARRVPDSKKTYARASTEASLLERDDNDDCFKECQIGSKDISDFVRKAVRASEAEARSANAPEEAVKAAGDAAADLVKTAASEEFKSTNDEQAAVLAASKAAETVIDAASAVEASRSSIGINSEAENVSCRETDSGEDVEDYFIPDAQSLAILREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLALLQQNSKNQEASKVALLLPDVMKLICALAAHRKFAALFVDRGGIQKLLAIPRMIQTFFGLSSCLFTIGSLQGIMERVCALPSDVVYHVVELALQLIECNQDQARKNAALFFAAAFVFRAVLDAFDSQDGLQKLLGLLNDAALIRSGVNSGALGLSNTGSLRNDLSSAEVLTSSEKQVAYHTCVALRQYFRAHLLLLVDSIRPNKSNRSAARNIPSVRAVYKPLDISNEAIDAVFLQLQKDRKLGPAFVRTRWPPVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNTTLSNNRVGIAVILDAANIVGSHVDPEIIQPALNVLVNLVCPPPSISNKPTVVMQAQQFSSAQITNGPPSESRDRTAQTSQIEPRERNGETGAATSGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREAVRSNNGIKVLLHLLQPRVYSPPAALDCLRALSCRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTLGTEQGRWQVELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHARELLLLVHEHLQASGLSQTASLLLKEAQLTPLPSLIAPSSLVQQPNTHETSSIQIHWPSGRAPAGLLTNKLKVNASDEDTSLKIDTVSAKKKSLTFSASFGTHSRHQLFDSPQSSGRKCLGTWKESSEASIVENPESSVKHSSDAVFKTPMFPMKRKLSDVKDIGILSSSGKRLNVGDQGLRSPICSSAIRKSGLKTDAVGFSTPISNLRSQQNRCTADYVDDNQYSNSNLGQMTPSCQVFSDIQLNNPERITLDSLVVQSLKHQHRQCPAPITTLPPLSLLHPHVCPEPKQSLDAPSNVTARLGTREYKFMNGGVHGNRRDRHFVYSRFRPWRTCRDDAGDLLTCVTFVGDSSHIAVGNHNGELKFFDSNNSSVVESFTGHQNPLTLVQSFVSGDNQLLLSSSSQDVMLWDATSILSGPTHSFEGCKAARFSNCGKVFAALSSESAQREILLYDIQTCQLELKLSDTPEASTGRSHVYSLIHFSPSDSMLLWNGVLWDRRVSGPVHRFEQLTDYGGGGFHPAGNEVILNSEVWDLRKFRLQRSVPSLDQTSITFNASGDVMYAILRRNLEDVMSAVHNTRRGKHPLFAAFRTLDAINYSDIATIPVDRCVLDFASEPTDSFVGLVTMDDQDEMYASARIYEIGRRRPTDDDSDPDDAESEEEDEDDEDDDDIDIDPLLGPGFDGDSESDADDTSNDEDDDSISDIGEDGDFILDDVDFDGGNDMLDIVTEGDEDEDDDDSEGYESLSSDEEDYVNNRNRFGY* |
ORF Type | 5prime_partial |
Blastp | DDB1- and CUL4-associated factor homolog 1 from Arabidopsis with 56.63% of identity |
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Blastx | DDB1- and CUL4-associated factor homolog 1 from Arabidopsis with 56.45% of identity |
Eggnog | Vpr (HIV-1) binding protein(ENOG410XR8C) |
Kegg | Link to kegg annotations (AT4G31160) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415007.1) |
Pfam | WD domain, G-beta repeat (PF00400.31) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer