Transcript | Ll_transcript_50485 |
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CDS coordinates | 420-3221 (+) |
Peptide sequence | MYESVVYQGDVVLGSVVIHPEEKIIHLKEIRISHFSQSSERCPPLAVLHTVTSTSVCFKMESKTTQQQDGLFHLHSLCIRENKTAIMPFGSEEIHLVAMYSRNNDRPCFWGFVVASGLYDSCLVMLNLRCLAIVFDLDETLIVANTMRSFEDRIEALQRKINSEVDPQRITGMQAEVKRYLDDKNILKQYAENDQVVDNGRIMKVQSEIVPALSESHQSIVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRGYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSNLINTKELLDRIVCVKSGLKKSLFNVFQNGFCHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPYYAPQAEASNAIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKAVPSPDVSNYLVSEDDTSASNGNRDPTLFDGMTDADVERRLKEAIIAAASSIPVATANLDPRLTTLLQYTVMPSDSVSPPKAQSSMMQFSSVPFLQPATLVKPMGQVAPPEPSLHSSPGREEGEVPESELDPDTRRRLLILQHGQDIRDHTSTEPPFPTSQPMQVSASHMPSRGAWFPVEVETGSQQLNRVVPKEFPVDSEPLHIEKHGRHRPSFFSKADNAISSDKILNESHQRLPKEMYHRDNRSRLSHKLSSYHSFSGDDIRLSRSFSSHRDPNSESGHSLLHADTPAVVLQEIALKCGTKVEFTSSLVASTELQFSVEAWFSGRRIGQGLGRTRKEAQHKASEESLKHLADIYLSRAEADSGSTYGNAKGFPKANDNGHVGNVNSPGNSSWPKEDSFSFSTSLDSSRVLDHRFEVSNGPMGPVSALKELCMMEGFGVRFQSLDAPASPNSSQKDAVYAQVEIDGQVFGKGTGLTWDEAKMQAAEKALGSLRSQNLQKQQGSPSLYGALRDILPSDKIMDTID* |
ORF Type | complete |
Blastp | RNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 57.96% of identity |
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Blastx | RNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 55.71% of identity |
Eggnog | CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190) |
Kegg | Link to kegg annotations (AT4G21670) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445654.1) |
Pfam | NLI interacting factor-like phosphatase (PF03031.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer