Transcript | Ll_transcript_50605 |
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CDS coordinates | 26-817 (+) |
Peptide sequence | MLNSDINEQLAGVACIEPGDVVLEIGPGTGSLTNVLLNSGAFVLAVEKDKHMAALVSERFSSTGKFKILTEDFVKCHVRSHMSSLVESLKQMDQETRNAKVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETALRLVVSSLRTSEYRPINIFVNFYSDPEYKFKVPRTHFFPQPNVDAAVVSFKLKPPTRYPQVSSSKSFFSMVNSAFNEKRKMLRKSLQHICTSLEIEEALTSIGLLATSRPEELTMDDFTKLHNLIVK* |
ORF Type | complete |
Blastp | Ribosomal RNA small subunit methyltransferase, chloroplastic from Arabidopsis with 71.1% of identity |
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Blastx | Ribosomal RNA small subunit methyltransferase, chloroplastic from Arabidopsis with 71.43% of identity |
Eggnog | Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (By similarity)(COG0030) |
Kegg | Link to kegg annotations (AT1G01860) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464969.1) |
Pfam | Ribosomal RNA adenine dimethylase (PF00398.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer