Transcript | Ll_transcript_49444 |
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CDS coordinates | 268-3816 (+) |
Peptide sequence | MYLYNLTLQQPTGIVCAINGSFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGSIRSLAQFRLTGAQKDYIVVGSDSGRIVILDYNKEKNVFDKIHQETFGKSGCRRIVPGQFIAIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYSICGVDCGFENPIFAAIELDYSEADLDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANLLVTVPGGGDGPSGVLVCAENFVIYKNQGHQEVRAVIPRRADLPSERGVLIVSAAMHKLKSMFFFLLQTEYGDIFKVTLEHDGDRVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALYQFKAIGDDDDVEVSSATLEETQDGFKPVYFRPRRLKNLVRIDQVESLMPIMDMKVSNLFEEETPQIFTLCGRGPRSSLRILRTGLAVSEMAVSRLPGIPSAVWTVKKNVIDEFDAYIVVSFTNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRTIAKVGYNRLQVVIALSGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSFDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFPIIVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCVEGVVSVAGEALRIFTVERLGETFNETVIPLRYTPRKFVLHPKRKLLVIVESDQGALTAEERESARKECFEATQAGENGTGSDPMENGGEDEDKDDALSDEHYGYPKTESDKWVSCIRVLDPKTGNTTCLLELQENEAAFSVCTVNFHDKEYGTLLAVGTAKGLQFLPRRTLTAGYIHIYRFVEDGRSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKRRLLRKCENKLFPNTIVSIHAYRDRIYVGDMQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGRIKWEQGKLNGAPNKVEEIVQFHVGDLITSLQKASLIPGGGECILYGTTMGSIGALHAFTSRDDVDFFSHLEMHLRQDHPPLCGRDHMAYRSAYFPVKVYRINIMLFALSFK* |
ORF Type | complete |
Blastp | Spliceosome-associated protein 130 B from Arabidopsis with 86.31% of identity |
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Blastx | Spliceosome-associated protein 130 B from Arabidopsis with 86.31% of identity |
Eggnog | Splicing factor 3b subunit(ENOG410XPFQ) |
Kegg | Link to kegg annotations (AT3G55200) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427968.1) |
Pfam | Mono-functional DNA-alkylating methyl methanesulfonate N-term (PF10433.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer