Transcript | Ll_transcript_50050 |
---|---|
CDS coordinates | 340-3057 (+) |
Peptide sequence | MVSDRYQNIMSDVAIQSILKNHEYGDELGFLIERERELSRLRSGSAPPTVEGSLTAVGGLFDSSVAAGMGLGGGRGYLGSEEDIRADPGYANYYYSNGANLNPRLPPPLLSKEDWRFAQQRFRGSKVGGIGDRRRVSGDEERSMFSVQPERKSAVEWGGNGDGFIGLPPAPGLGSRQRNFPAVFQDEINNAAFASKQPHRQPSRNAFDDIPEESETHFSYLEQELDALQSGGNKMGMPASKNLVGMASQTYASALGASLSRSTTPDSQLLPRAASPCLPPIGDGRSSSADKRTSNGQSSFNTVSSSLNEAADLVSALSGMNLSASDTVDGVKHHQSPRHTEVDYNHDVNKHSYQNKLDSFSFQSHSANHSHLEVSKSGGFGLDLNNSSMYANEQLDPRKAGGISFNSYFKGPSTTSPTSRGNSPAHYPNFDDMSNSYPNYGFSGYTVNPSSPSMMGNQIGSGNVLPLFDNAAAAAAIRMNALDHRALGRGAALGPLMAASELQNLSRFGNYAASSTNQLPLMDPLYPQYPRSDEFAATQIAALNESAINRGYTNNSFANLTSLQRGDVESLIASQKSHIGGVPYLAKSASLNHNSYRNPSYGLGMAYPGSPVAGSRFPNSLYGPGSPMSQTERNMHLSGMMNMAGGFMGAWHSDAVSSLDENFASSLLDEFKNNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETASMDEINMVFHEIMSQALSLMTDVFGNYVIQKFFEHGTKAQIRELADQLTSHVLTLSLQMYGCRVIQKAIEVVTLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDVIHFIVSTFYDQVVTLSTHPYGCRVIQRVLEYCRDPKTQQIMMDEILRSVRMLAQDQYGNYVVQHVLEHGKPHECTAIIKELTGQIV |
ORF Type | 3prime_partial |
Blastp | Pumilio homolog 1 from Arabidopsis with 48.2% of identity |
---|---|
Blastx | Pumilio homolog 1 from Arabidopsis with 48.41% of identity |
Eggnog | pumilio homolog(COG5099) |
Kegg | Link to kegg annotations (AT2G29200) |
CantataDB | Link to cantataDB annotations (CNT0000352) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433072.1) |
Pfam | Nucleic acid binding protein NABP (PF07990.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer