Transcript | Ll_transcript_50052 |
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CDS coordinates | 1-2295 (+) |
Peptide sequence | AAGMGLGGGRGYLGSEEELRADPGYANYYYTNGANLNPRMPPPLVSKEDWRFSQQRLRGSNVGGIGDRRRMSGDEERSLFSVQPERKSAVEWGGNGDGLIGLPPALGLGNRHRSFPGVFQDEINDAASASKQTHRLPSRNAFDDIAEESETHYAFLEQELDAFKSSGNQQGISGAKNLVGSASQSYASALGASLSRSTTPDPQLLPRAPSPCLPPIGDGRSSSADKRTPNGQNSFNAISSGLNDPADLVSAMGGMNLSAADKVGDERHPQSPRHSEVDYNHDVNKHSYLNKLDSLSFQSHSASQSHLKVSENGFGLDLNNSSMYANEQLEPSKVGGISVNSHFKGPSTPTLTNRGNSPAHYQNFDHMSDSYPNYGLSGYAVNPSSPSMMASQIGNGNIPPFFENAAAAALGVNALDSRTLGRGAPLGSLLAASELQNASRLGNHAAGRTNQLPVMDPMYLQYLRQEELAVAQIAALAGSAINGGYTNNSFTDLPGFQNGFVESSIASKNPHSGGVPYLGKSASLNHNSYRNPSYGLGMAYPGSPVAGSRFPNSLYGLGSPMCQTERNMHLSGMRNVAGGFMGAWNPDAVSSLDENFASSLLDEFKNNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETASMDEKNMVFHEIMPHALSLMTDVFGNYVIQKFFEHGTEAQIREFADQLTGHVLTLSLQMYGCRVIQKAVEVVTLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDAIHFIFSTFFDQV |
ORF Type | internal |
Blastp | Pumilio homolog 1 from Arabidopsis with 45.77% of identity |
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Blastx | Pumilio homolog 1 from Arabidopsis with 44.85% of identity |
Eggnog | pumilio homolog(COG5099) |
Kegg | Link to kegg annotations (AT2G29200) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455795.1) |
Pfam | Nucleic acid binding protein NABP (PF07990.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer