Transcript | Ll_transcript_50056 |
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CDS coordinates | 458-3166 (+) |
Peptide sequence | MASGSYRNMMSDVVTRSMLGNHEYGEELGVLIERERELSKLRSGSAPPTVEGSLTAVGGLFDSSVAAGMGLGGGRSYLGNEEELRADPGYANYYYSNGANLNPRLPPPLISKEDWRFAQQRLRGPMVGGIGDMRRMSGEERSMFSVQPERNSAVEWSGNGDGLIGLPPALGLGSRQSSFAGVFQDEINNAASASKQPHRPPSRNVFGDIPEESETHFNFLGQELDALQSGGNKQGISASTNLVGMASQTYASALGASLSRSTTPDSQLLPRAASPCLPPIGDGRSSSADKRTSIGQSSRNTISSGLNEPTDLVSALAGINLSTTDTVDGEKHHQSSRHTEVDYNHDVNKHSYLTNPDSLSFQSHSANQSHLEVSKSCGFGVDLNNSSMYANEQLDPRKAGGISAKSYFKGPSTPILTSRGNSPAHYQNFDDMSNSYPNYGLSGYAVNPSSPSMMASQIGSGNVPPFFDNAAAALRMNALDSRGLGGGAALGPLLAVSELQNLSRLGNHAASSTNQLPLMDPLYPHYLRSDEFVATQIAALNESAINRGYTNNYFTDLAGLQRGDLESLIASKKSHSGGVPYLAKSASLNHNSYRNPSYGLGMAYPGSPVAGSLFPNSLYGPGSPMSQTERNMHLSGMRNIAGGFMGAWHSDAVSSLDENFASSLLDEFKNNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETASMDEINMVFHEIMSQALSLMTDVFGNYVIQKFFEHGTKAQIRELADQLTSHVLTLSLQMYGCRVIQKAIEVVTLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDVIHFIVSTFYDQVVTLSTHPYGCRVIQRVLEYCRDPKTQQIMMDEILRSVRMLAQDQYGNYVVQHVLEHGKPHECTAIIKELTGQIV |
ORF Type | 3prime_partial |
Blastp | Pumilio homolog 1 from Arabidopsis with 48.36% of identity |
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Blastx | Pumilio homolog 1 from Arabidopsis with 47.49% of identity |
Eggnog | pumilio homolog(COG5099) |
Kegg | Link to kegg annotations (AT2G29200) |
CantataDB | Link to cantataDB annotations (CNT0000352) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433060.1) |
Pfam | Nucleic acid binding protein NABP (PF07990.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer