Protein coding transcript 257647

TranscriptLl_transcript_38942
CDS coordinates582-6284 (+)
Peptide sequenceMGYHSDNSQDGREEDDEEEYEENGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPPDVVEQDCGEKAEDAVDYEDIDEEYDGPETEAATEEDYLLPKMNFFSTEASLQVLESRASVFDDENYDEESEEEQDLVNNDSKVDDISLTGEQKESSVDVSKGESAEELGLQVDLPQTEELDTEIQKVVEEPEVLKRSTPLPILCVEDGVAILRFSEIFGIHEPLRKGEKRDHHHSIPRDRYKSFNFSDDTVEEDEEAFLKGFSQNLSLTRQACVVRNDVSESNDVDLEFPKFGFLHGDASMDVKDDRQQKDCCQSAEPMKVDLAEGLSRKDDSLIGSSFYPLDQQDWEDEIIWGNSPAGDNIVQSCEIYGSDLGDSGGNEIEIESEKNLQLNPLKTGEKDDNDFTCGPSVSVEPFGSRDTSGSKTDLLSESLFHPQLLRLESRSQEDSSCPADGRGVNITEKHNQIGQVKCFTKVLSQNREMMEGSWLDKIIWEELDKPIIKPKLIFDLQDDQMHFEVLDSKDTRHLRLHAGAIILTRSLKSNSGDSSELPGHGGQHGWRSVANDKHYSNRKTSQQLKSNSKKRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDNEMAVKEQGKLATQGPMKIIMKSLGGKGCKLHVDAEETLSSVIVKASKKLDFKASETVKIFYSGRELEDYKSLAAQNVQPNSLFHLVRTKIHLWPRAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNVGMGARLCTYYQKCSPDDQSGSLLRNTNSSLGHIISLDPADKSPFLGDIKPGCSQSSLETNMYRAPLFPHKVPLTDYLLVRSSKGKLSLRRIDKVNVVGQQEPLMEVLSPGSKNLQTYMMNRLLVYMCREFQAAEKRHLPPYIRIDEFLSQFPYLSEASFRKRIKEYANLQRGSNGQSILVKKRNFRMWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTHISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGMGFSYARAPPKAPVSSAMVKKKAPANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPSTISKYARGQRMSFLQLQQQTREKCQEIWDRQIQTLSAINYDEDESESEGNSDLDSFAGDLENLLDAEEFEEGEEGTNDSKRDKGDGVKGLKMRRRATSAQAEEEIEDEAAEAAELRRLLMDDDEADRKKKKKARVVVEEARLVPKLQSKFIFDNNEKVNQISNTLQLDATKHWKEDIITDLREEEIFSSKKSKSVKVSKAKKNDAAPISLPNKKIKLNMGEPIKVFKEKKPSRETFVCGACGQLGHMRTNKNCPKYGEDLEPQLEFTDMEKSSGKADPSSYSQRKALPKKSISNSATRIAPVENSSKIPLKFKCSSNEKSYDKPAIDTLQSSDKPVTSDTETAKPVKVNKITFPKKAKPDDTQADSHSPAIVIRPPTDSGRGQIDSHNKLPIKIRQPPVEVDREQSHKKKIVIKHSKEDYYKIDQDLDSPGGNTGFEHRKTKRIVELSNLEKQRNQQPMYSTEGLVKWKGKEDRRWWEGQEKQKNEARLREDRAWRHHKEFKMPKEQKIDEIRRYEEDIRREREEEERQKAKKKKKKLEFGDEYLDDPRTRHDKRMLDRSGKRRSVELGKGGAEYVQPIKRRRGGGGEVGLANILESIVDSIVKDRNDLSYLFLKPVSKKEAPDYLDIIERPMDLSRIRERVRNMEYKSREDFRHDMWQITYNAHKYNDGRNPGIPPLADMLLEHCDYLLNENDDNLTAAEAGIEIRDLCIGGAGYLLSNQMYDGMLFNVFD*
ORF Typecomplete

Annotations of Ll_transcript_38942

BlastpTranscription initiation factor TFIID subunit 1 from Arabidopsis with 52.92% of identity
BlastxTranscription initiation factor TFIID subunit 1 from Arabidopsis with 51.19% of identity
Eggnogbromodomain(COG5076)
KeggLink to kegg annotations (AT1G32750)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019445197.1)
PfamTATA box-binding protein binding (PF09247.10)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer