Transcript | Ll_transcript_144930 |
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CDS coordinates | 161-5008 (+) |
Peptide sequence | MAKGVISDDEDEVELDEEEREPVEGDGLDEGRDVDDDEDEEEEGQDEYENDGFIVDGDEEEQDEEERAESDEERHKRRKKKRKEEYILDEDDYELLEDNNINIHRRKDIKKFKRLKKGQRDTEEEPSGLSDEEDFVGSGKVGRTAEEKLKHRLFGDEEALLEDIVEEEEQGEEEEDADIGEDDEMADFIVDEEEIDENGAAMRRRKPKRKKTRQAPGVSSSAVQEAQDLFGDVEELLQTRKKNLELHEYRETRLEDEFEPIIISEKYMTEKDDVIREVDLPERMQISEESTGTPPLDGSIDEESQWIVKQLSEGAVPWICKKISTPQNNRKNLPIDENDIIRFLELYHVQKLDIPFIAMYRKEECLSLLKDLERPEAGGESSDKNNMTPTLKWHKVLWALLDLDRKWLLLQKRKGALESYYTKRFEEESRRIYDETRLNLNRQLFESVMRSLKDAESEREVDDVDSKFNLHFPPGEAGVDEGQYKRPKRKSVYSTYCKAGLWEVANRFGCSSEQLGICLSEVKVPELVDPKETPEEMASNFTCAMYNTPEEVLKCARHMAAIEVSCEPSIRKHVRSHFLDHAVVSTCPTADGNVAIDSFHDFAVVKWLREKPLSKFDDAQWLLIQKAEEEKLLQVTIKLPEENLNKLIDQFNEYYVSDSVSRSAQLWNEQRKLILKDAIFRLLLPSMDKEARGVLASKAKNWLLMEYGNALWNKVSVGPYQQKENDLSSDDEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTLRSQNPSDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDLYEVIFKMVEENPRDVGHEMDGLSVVYGDESLPRLYENSRISSEQLPSQQGIVRRAAALGRYLQNPLAMVATLCGPRREILSWKLNSLESFLNPDDKFGMVEQVMVDVTNQVGLDINLAISHEWLFSPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFLKKHKLEKKVFVNAVGFLRIRRSGLAASSSEYIDLLDDTRIHPESYVIAQELAKDVYEEDGTGDGNDDDDALDLAIEHVRERPSYLKNLDVVEYATAKEEQKKKQPSIVINLLKKIETLHDIKSELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKIVQATVRRVQAQKAICGLDSGMTGILMKEDYSDEYRDIIELSDRLHEGDMLTCKVKSIQKNRYQVFLVCKDSEMRSNRLHNSRDLDPYYYEGRTCLQSEQDKARKEKELAKKHFKSRMIIHPRFQNITADEAMEFLSGKDLGDSIVRPSSRGPECLTLTLKIHDGVYAHKEIVEGGKERKDITSLLRIGKTLKIGDDTFEDLDEVMDRYVDPLVTHLKEMLNYRKFRRGTKSEIDELLRIEKVENPLRIVYSFGILHEHPGTFILTYIRSTNPHHEYIGLHPKGFRFRKKMFEDIDRLVAYFQRHIDDPQHDSTPSLRSVAAMVPMRSPAAGGSSRASGGSGWGSSNNEGGRRGDSYARDRSSTPGSRTGRSDYRNNGNLDEHPSGLPRPYGGGRGRDRGSYNNDSRGHGSNNEREGRRVSNTRDGDDGLSNFPGAKVQNSPGREAFPGGWGGSGGGSDWGGGAGTSDNGGRGGGAGAG* |
ORF Type | complete |
Blastp | Transcription elongation factor SPT6 homolog from Arabidopsis with 65.66% of identity |
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Blastx | Transcription elongation factor SPT6 homolog from Arabidopsis with 68.29% of identity |
Eggnog | domain protein(COG2183) |
Kegg | Link to kegg annotations (AT1G65440) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447115.1) |
Pfam | Acidic N-terminal SPT6 (PF14632.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer