Transcript | Ll_transcript_144915 |
---|---|
CDS coordinates | 229-5082 (+) |
Peptide sequence | MARGVISDDEDEVELDEEEREPVDGDGLDEGRDVDDDEEDEEEEGQDEYENDGFIVDGDEEEQDEEERAESDEERQKRRKKKRKEEYVLDEDDYELLEDNNINIHRRKDIKKFKRLKKGQRDTEEEPSGLSDEEDFVGSGKVGRTAEEKLKHRLFGDDEGAPLEDIAEDEEQGEEEEEDADIGEDDEMADFIVDEEEVDENGAPMRRTKPKKKIRQAPGVSSSAVQEAQDIFGDVDNFLLTRKKNLESNEYRETRLEDEFEPIILSEKYMREEDDQIREVDLPERMQISEMSTGTPPLDGSIDEESQWIVKQLSEGAVPWICKKNPTSQNNRKNLPIDENDIIRFLELYHVQKLDIPFIAMYRKEECLSLLKDLERPEAGGESSDKNNMTPTLKWHKVLWALLDLDRKWLLLQKRKGALESYYTKRFEEESRRIYDETRLNLNRQLFESVMRSLKDAESEREVDDVDSKFNLHFPPGEAGVDEGQYKRPKRKSVYSTYCKAGLWEVANRFGCSSEQLGICLSEVKVPELVDPKETPEEMASNFTCAMYNTPEEVLKCARHMAAIEVSCEPSIRKHVRSHFLDHAVVSTCPTADGNVAIDSFHDFAVVKWLREKPLSKFDDAQWLLIQKAEEEKLLQVTIKLPEENLNKLIDQFNEYYVSDSVSRSAQLWNEQRKLILKDAIFRLLLPSMDKEARGVLASKAKNWLLMEYGNALWNKVSVGPYQQKENDLSSDDEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTLRSQNPSDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDLYEVIFKMVEENPRDVGHEMDGLSVVYGDESLPRLYENSRISSEQLPSQQGIVRRAAALGRYLQNPLAMVATLCGPRREILSWKLNSLESFLNPDDKFGMVEQVMVDVTNQVGLDINLAISHEWLFSPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFLKKHKLEKKVFVNAVGFLRIRRSGLAASSSEYIDLLDDTRIHPESYVIAQELAKDVYEEDGTGDGNDDDDALDLAIEHVRERPSYLKNLDVVEYATAKEEQKKKQPSIVINLLKKIETLHDIKSELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKIVQATVRRVQAQKAICGLDSGMTGILMKEDYSDEYRDIIELSDRLHEGDMLTCKVKSIQKNRYQVFLVCKDSEMRSNRLHNSRDLDPYYYEGRTCLQSEQDKARKEKELAKKHFKSRMIIHPRFQNITADEAMEFLSGKDLGDSIVRPSSRGPECLTLTLKIHDGVYAHKEIVEGGKERKDITSLLRIGKTLKIGDDTFEDLDEVMDRYVDPLVTHLKEMLNYRKFRRGTKSEIDELLRIEKVENPLRIVYSFGILHEHPGTFILTYIRSTNPHHEYIGLHPKGFRFRKKMFEDIDRLVAYFQRHIDDPQHDSTPSLRSVAAMVPMRSPAAGGSSRASGGSGWGSSNNEGGRRGDSYARDRSSTPGSRTGRSDYRNNGNLDEHPSGLPRPYGGGRGRDRGSYNNDSRGHGSNNEREGRRVSNTRDGDDGLSNFPGAKVQNSPGREAFPGGWGGSGGGSDWGGGAGTSDNGGRGGGAGAG* |
ORF Type | complete |
Blastp | Transcription elongation factor SPT6 homolog from Arabidopsis with 66.02% of identity |
---|---|
Blastx | Transcription elongation factor SPT6 homolog from Arabidopsis with 68.46% of identity |
Eggnog | domain protein(COG2183) |
Kegg | Link to kegg annotations (AT1G65440) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458019.1) |
Pfam | Acidic N-terminal SPT6 (PF14632.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer