Transcript | Ll_transcript_144920 |
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CDS coordinates | 845-2857 (+) |
Peptide sequence | MADFIVDEEEVDENGAPMRRTKPKKKIRQAPGVSSSAVQEAQDIFGDVDNFLLTRKKNLESNEYRETRLEDEFEPIILSEKYMREEDDQIREVDLPERMQISEMSTGTPPLDGSIDEESQWIVKQLSEGAVPWICKKNPTSQNNRKNLPIDENDIIRFLELYHVQKLDIPFIAMYRKEECLSLLKDLERPEAGGESSDKNNMTPTLKWHKVLWALLDLDRKWLLLQKRKGALESYYTKRFEEESRRIYDETRLNLNRQLFESVMRSLKDAESEREVDDVDSKFNLHFPPGEAGVDEGQYKRPKRKSVYSTYCKAGLWEVANRFGCSSEQLGICLSEVKVPELVDPKETPEEMASNFTCAMYNTPEEVLKCARHMAAIEVSCEPSIRKHVRSHFLDHAVVSTCPTADGNVAIDSFHDFAVVKWLREKPLSKFDDAQWLLIQKAEEEKLLQVTIKLPEENLNKLIDQFNEYYVSDSVSRSAQLWNEQRKLILKDAIFRLLLPSMDKEARGVLASKAKNWLLMEYGNALWNKVSVGPYQQKENDLSSDDEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTLRSQNPSDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVRIWFLCMRHYFGSIPFHSTNHAPNGLFYICTNFLK* |
ORF Type | complete |
Blastp | Transcription elongation factor SPT6 homolog from Arabidopsis with 66.72% of identity |
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Blastx | Transcription elongation factor SPT6 homolog from Arabidopsis with 63.51% of identity |
Eggnog | domain protein(COG2183) |
Kegg | Link to kegg annotations (AT1G65440) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458019.1) |
Pfam | Helix-turn-helix DNA-binding domain of SPT6 (PF14641.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer