Transcript | Ll_transcript_255734 |
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CDS coordinates | 156-1967 (+) |
Peptide sequence | MDPILQSRSNPLLLSSSPLTPTSQNPIFFTPHYRTPTIRKLKFRILANGSPWLDISESLRRGSRRFWLKFGEMVKKEAGFDLEDFGNVSKVGEVVDGVKARGDEFGRFGTNWVSEFVDWNRWGRWKNIKNWEPKRIGALVLYIFVVAFTCRGIYIAIQAPYLNRQKKELTEAYMEALIPEPSPSNIRRFKKGIWKKTTPKGLKMKKFIEGPDGTLVHDNSYVGEDAWEDDLEAPEEHVKKIIEDDERLKKEEKKELTKGLGISGEVQTEGTWRERLHQWREILRKERLVEQMDSSNSKYVVEFDMKEVENSLRKDVAEKVTGTEGTRALWIAKRWWQYRPKLPYNYFLDKLDSSEVEAIVFTEDLKRLYVTMKEGFPLEFVVDIPLDPYLFEMITSSGAEVDLLQKKQIHYFMKVVFALLPGILILWLIRESVMLLHITSSRFLYKKYNQLFDMAYAENFIMPVGDVGETKSMYKDVVLGGDVWDLLDELMIYMGNPMQFYEKGVQFVRGVLLSGPPGTGKTLFARTLAKEGGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPCFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGE* |
ORF Type | complete |
Blastp | ATP-dependent zinc metalloprotease FTSH 12, chloroplastic from Arabidopsis with 66.51% of identity |
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Blastx | ATP-dependent zinc metalloprotease FTSH 12, chloroplastic from Arabidopsis with 71.53% of identity |
Eggnog | Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465) |
Kegg | Link to kegg annotations (AT1G79560) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413145.1) |
Pfam | ATPase family associated with various cellular activities (AAA) (PF00004.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer