Transcript | Ll_transcript_255740 |
---|---|
CDS coordinates | 156-2843 (+) |
Peptide sequence | MDPILQSRSNPLLLSSSPLTPTSQNPIFFTPHYRTPTIRKLKFRILANGSPWLDISESLRRGSRRFWLKFGEMVKKEAGFDLEDFGNVSKVGEVVDGVKARGDEFGRFGTNWVSEFVDWNRWGRWKNIKNWEPKRIGALVLYIFVVAFTCRGIYIAIQAPYLNRQKKELTEAYMEALIPEPSPSNIRRFKKGIWKKTTPKGLKMKKFIEGPDGTLVHDNSYVGEDAWEDDLEAPEEHVKKIIEDDERLKKEEKKELTKGLGISGEVQTEGTWRERLHQWREILRKERLVEQMDSSNSKYVVEFDMKEVENSLRKDVAEKVTGTEGTRALWIAKRWWQYRPKLPYNYFLDKLDSSEVEAIVFTEDLKRLYVTMKEGFPLEFVVDIPLDPYLFEMITSSGAEVDLLQKKQIHYFMKVVFALLPGILILWLIRESVMLLHITSSRFLYKKYNQLFDMAYAENFIMPVGDVGETKSMYKDVVLGGDVWDLLDELMIYMGNPMQFYEKGVQFVRGVLLSGPPGTGKTLFARTLAKEGGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPCFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGVDRLSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFGVHSSGKQLAEDVNFEKLVFRTVGFSGADLRNLVNEAAIMSVRKGHSKIFQEDIIDVLDKQLLEGMGVLLTEEEQQKCEESVSFEKRRLLAVHEAGHVVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDVVDQGYTTFGYMKMQMVVAHGGRCAERVVFGDDITDGGRDDLEKITKIAREMVISPQNPRLGLLGLTKRIGLDDRPDSSDGELIRYRVYSFYEVPNIYIAFLSAM* |
ORF Type | complete |
Blastp | ATP-dependent zinc metalloprotease FTSH 12, chloroplastic from Arabidopsis with 71.68% of identity |
---|---|
Blastx | ATP-dependent zinc metalloprotease FTSH 12, chloroplastic from Arabidopsis with 73.9% of identity |
Eggnog | Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465) |
Kegg | Link to kegg annotations (AT1G79560) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413145.1) |
Pfam | ATPase family associated with various cellular activities (AAA) (PF00004.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer