Transcript | Ll_transcript_256401 |
---|---|
CDS coordinates | 1825-3096 (+) |
Peptide sequence | MHHTDAIAELFAVQVQEHNVGQDDFSAIAQNMALELAILLHTYSEVFNKPIGLPPQRSQDHAIPLLDGSNPVKVKPYRYAHSQKSEIEKMVHNMLQEGIIQPSTSPFSSPILLVKKKDGSWRFCTDYRALNAITIKDSFPMPTVDELLDELFGAQFFSKLDLRSGYHQILVKPEDRHKTAFRTHQGHYEWLVMPFGLTNAPATFQQLMNQVFQRLPRKCVLVFFYDILVYSPSWSSHLHDLEVVLQTLQANVLYAKLSKCTFGTQQVDYLGHTVSNQGVAMDKIKVQDILKWPAPKNIKQFRGFLGLTGYYRKFIQNYTSVANPLTNLLKKDAFAWSPEAQTAFIVLKQLVTTAPVLALPNFQQPFTLETDASGTGVGAVLSQNKHPIAYFSKKLNPECRNSQHIVESCMPLQKLWPNSDTIY* |
ORF Type | complete |
Blastp | Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 44.95% of identity |
---|---|
Blastx | Transposon Tf2-6 polyprotein from Schizosaccharomyces with 31.22% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_015969943.1) |
Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer