Transcript | Ll_transcript_16358 |
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CDS coordinates | 3-2624 (+) |
Peptide sequence | SHEKGVTLVRDLGHSSSSSSSSAHSYVMQSKSSNEMASAQNVELEAAKFLHKLIQDSKDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMETVINQHGLDIEALKSSRLPLAGGPQIGSSSQAVGVGKDSRVGLAENEMSKMDPLATGRPPVAPSGGAPDYYHGSVAQRSSQSFDHGSPSSLDSRSGNSQSQDRRDTANWDKQVNQKDDKKATAKRKRGDTSPPAELHVDSPSQLDPRNTVANARKGKQNKAEPSDGLPGAYAKVHGGMSVPTSASPFAEPVFSSPMQHVGTLERDAGSLATLDQIGRQSSGSEMTMLREGVHSRDTGKSTVTAAPVSPVMLFKEQQLKQLRAQCLVFLAFRNCLVPKKLHLEIALGTPFSREDGSCKDLADHKGKLQSFNEPGNTSGVMMPFGDASGSSSAGKVHEAETLSRGTESPRVMDDIGNLHSDMHILSEERKHLIATKSEVERQMQERVAGQASSATSCHQQHSLSTRGAVVSKQFDDVDMQIDGLKAGSVDDSFKHGLAEQDGNERSVLAYLPPPKYTMSERWIMDQRKRRHRVEQKLVQRQQKTKQKMVTSFHMLKEKVSSSEDISAKTKSVIELKKLQLLELQHRLRSDFLNDFFKPITTEMEHLKSVKKHRHGRRVKQLERYEQKMKEERQKRIRERQKEFFSEIEVHKEKLDDVFKAKRERWKGFNRYVKEFHKRKERSHREKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLQEAKAAAGHFGHDVDEIGRASFLENSETNLENEDEGDQAKHYMESNEKYYMMAHSIKESVAEQPSILLGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQ |
ORF Type | internal |
Blastp | Chromatin structure-remodeling complex protein SYD from Arabidopsis with 52.82% of identity |
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Blastx | Chromatin structure-remodeling complex protein SYD from Arabidopsis with 55.71% of identity |
Eggnog | helicase(COG0553) |
Kegg | Link to kegg annotations (AT2G28290) |
CantataDB | Link to cantataDB annotations (CNT0001011) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450810.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer