Transcript | Ll_transcript_14942 |
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CDS coordinates | 190-2475 (+) |
Peptide sequence | MSRRGMDDDEFDDEEEEHVADFDDEEEEERGDGMKRRRSGFIDDDADEVDEDEEEEDDDDDEDFDGGGGGRKRQRKRKSAASYFDEEAAVDSDEEEEEEEGEDDFIVDGGSDLPEEHDGRSLRRARMLPHDDEDHEDLEAVAQSIQQRYARRQADYDEETTDVEQQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRSVIALDHLKNYIYVEADKEAHVREACKGLRNIFGQKITLVPIREMTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALSNKLEGREVVKKKAFVPPPRFLNVEEARELHIRVEHRRDAYGERFDAIGGMMFKDGFLYKTVSIKSISAQNIKPTFDELEKFRKPGENGDGDVASLSTLFANRKKGHFLKGDAVIVIKGDLKNLKGWVEKVDEDNVHIRPEIKGLPKTLAVNEKELCKYFEPGNHVKVVSGAQEGATGMVVKVEQHVLILISDTTKEHIRVFADDVVESSEVTTGVTRIGDYELRDLVLLDNMSFGVIIRVESEAFQVLKGVPDRAEVVLVKLREIKCKLDKKISVQDRFKNTVSAKDAVRIVEGPCKGKQGPVEHIYRGILFICDRHHLEHAGFICVKAQSCVVVGGSRSNGDINGNAYSRFGSLRTPSRIPQSPSRFSRGGPPIHSGGRGRGGRGHDGLTGSTVKVRQGPYKGYRGRVIEVKGTSVRVELESQMKVVTVDRNHISDNVAVTPYRESRYGMG |
ORF Type | 3prime_partial |
Blastp | Putative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 73.23% of identity |
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Blastx | Putative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 74.06% of identity |
Eggnog | Transcription elongation factor(COG5164) |
Kegg | Link to kegg annotations (AT4G08350) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416440.1) |
Pfam | Spt5 transcription elongation factor, acidic N-terminal (PF11942.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer