Transcript | Ll_transcript_41734 |
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CDS coordinates | 75-1415 (+) |
Peptide sequence | MKSMKLSTFILITATVFSIWSSSFEGCSATQAMHWRKLKAVPATYNVLDYGAKGDGHADDTKAFELAWADACKMEASTMIVPSGSIFLVKPISFSGLNCDPNIVFQLDGKIIAPTYPAAWGSGTLQWLEFTKLNKITIKGKGVIDGQGSVWWNDSPTNNPTSESTNTTSQFSIQANSGKLPSTKPTALRFYGSNGVTVTDITIKNSQQTHLKFDSCTNVHVSNINVSSPGDSPNTDGIHLQNSQDVGIYSSTLACGDDCVSIQSGCSNIYVDNVNCGPGHGMSIGSLGRENTKACVTNVTIRDITLHDTLTGVRIKTHQGGSGSVQDVMFSNIQVSRVETPIIIDQYYCDKGKCQNYTSAVAVSNIHYINVKGTYTKEPVYFACSDNLPCTGITLDTIQLQSSSSEVVPFCWEAYGELKTKTVPPVDCLEKGNPSSIGIQSNKNSC* |
ORF Type | complete |
Blastp | Polygalacturonase At1g48100 from Arabidopsis with 44.97% of identity |
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Blastx | Polygalacturonase At1g48100 from Arabidopsis with 44.7% of identity |
Eggnog | Glycoside hydrolase family 28(COG5434) |
Kegg | Link to kegg annotations (AT1G48100) |
CantataDB | Link to cantataDB annotations (CNT0002960) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427342.1) |
Pfam | Pectate lyase superfamily protein (PF12708.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer