miRNA 269 details

Id Micro269
SequenceTCGTGGGATTTATGCAGTTAA 
Annotated namesosa-miR5797; 
Annotated pre-miRNANone

Targets of miRNA 269

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_270052; FTRINITY_DN71839_c0_g1_i1 109 129 TTAACTGCATGAATCCTATGG BLAST psRNATarget
Ll_transcript_22448; FTRINITY_DN55190_c0_g1_i15 1603 1623 TGGGCTGCATAAATCCCGTGA BLAST psRNATarget
Ll_transcript_22451; FTRINITY_DN55190_c0_g1_i18 1603 1623 TGGGCTGCATAAATCCCGTGA BLAST psRNATarget
Ll_transcript_22446; FTRINITY_DN55190_c0_g1_i13 1603 1623 TGGGCTGCATAAATCCCGTGA BLAST psRNATarget
Ll_transcript_22439; FTRINITY_DN55190_c0_g1_i6 1603 1623 TGGGCTGCATAAATCCCGTGA BLAST psRNATarget
Ll_transcript_106081; FTRINITY_DN52994_c4_g1_i5 1091 1111 GAAACTGGATAAATCTCATGA BLAST psRNATarget
Ll_transcript_106075; FTRINITY_DN52994_c4_g1_i3 1004 1024 GAAACTGGATAAATCTCATGA BLAST psRNATarget
Ll_transcript_223734; FTRINITY_DN53129_c0_g1_i3 24 44 TTTACTGCATAAATCCTGTGA BLAST psRNATarget
Ll_transcript_175549; FTRINITY_DN25953_c0_g2_i1 408 428 TTAAGTGTGTAAATTCCACGA BLAST psRNATarget
Ll_transcript_223728; FTRINITY_DN53129_c0_g1_i1 157 177 TTTACTGCATAAATCCTGTGA BLAST psRNATarget
Ll_transcript_60916; FTRINITY_DN56297_c4_g1_i1 524 544 CCGACTGTGTAAATCTCATGA BLAST psRNATarget
Ll_transcript_71190; FTRINITY_DN56064_c0_g8_i1 112 132 TGAGTTTCATAAATTCCACGA BLAST psRNATarget
Ll_transcript_167687; FTRINITY_DN57309_c1_g1_i2 516 536 AAAACTTCATAGATCCTATGA BLAST psRNATarget
Ll_transcript_59943; FTRINITY_DN56218_c1_g7_i1 1738 1758 CTGATTGGATAAATCTTACGA BLAST psRNATarget
Ll_transcript_120899; FTRINITY_DN58207_c1_g2_i1 64 84 TGAATTGTATAAAGCCCATGA BLAST psRNATarget
Ll_transcript_241945; FTRINITY_DN53075_c0_g1_i1 17 37 ATAATTGTATAGATTTCATGG BLAST psRNATarget
Ll_transcript_15624; FTRINITY_DN59243_c1_g1_i1 315 335 GTAATTGTGTAAGTTTCGCGA BLAST psRNATarget
Ll_transcript_15628; FTRINITY_DN59243_c1_g1_i5 404 424 GTAATTGTGTAAGTTTCGCGA BLAST psRNATarget
Ll_transcript_187104; FTRINITY_DN51822_c0_g1_i2 1006 1026 CTAATTGCAGAAATCCGACGA BLAST psRNATarget
Ll_transcript_187108; FTRINITY_DN51822_c0_g1_i5 1060 1080 CTAATTGCAGAAATCCGACGA BLAST psRNATarget
Ll_transcript_218503; FTRINITY_DN56356_c0_g1_i10 633 653 AAGATTGAATAAATTTCATGA BLAST psRNATarget
Ll_transcript_46165; FTRINITY_DN88587_c0_g1_i1 157 177 CTGAGTGCATAAGTTCCATGG BLAST psRNATarget
Ll_transcript_8090; FTRINITY_DN80754_c0_g1_i1 51 71 GAAACTGCGTAAGTTTCATGT BLAST psRNATarget
Ll_transcript_42095; FTRINITY_DN78298_c0_g1_i1 378 398 CATGCTGCATGAATTCTATGA BLAST psRNATarget
Ll_transcript_109585; FTRINITY_DN51422_c0_g1_i1 1868 1888 TGAATTGCATAGATTTTATGG BLAST psRNATarget
Ll_transcript_123422; FTRINITY_DN53716_c1_g2_i4 103 123 TAAACTGCATAGCTTCTATGA BLAST psRNATarget
Ll_transcript_123417; FTRINITY_DN53716_c1_g2_i1 103 123 TAAACTGCATAGCTTCTATGA BLAST psRNATarget
Ll_transcript_173889; FTRINITY_DN52134_c0_g1_i8 631 651 TAAGCTGTATAAATTGCGCGA BLAST psRNATarget
Ll_transcript_173891; FTRINITY_DN52134_c0_g1_i10 631 651 TAAGCTGTATAAATTGCGCGA BLAST psRNATarget
Ll_transcript_173890; FTRINITY_DN52134_c0_g1_i9 631 651 TAAGCTGTATAAATTGCGCGA BLAST psRNATarget
Ll_transcript_164016; FTRINITY_DN53216_c0_g1_i7 1261 1281 ACCATTGCATGAGTTCCACGG BLAST psRNATarget
Ll_transcript_173888; FTRINITY_DN52134_c0_g1_i7 631 651 TAAGCTGTATAAATTGCGCGA BLAST psRNATarget
Ll_transcript_367876; TRINITY_DN48622_c0_g1_i9 1602 1622 TGGGCTGCATAAATCCCGTGA BLAST psRNATarget
Ll_transcript_367872; TRINITY_DN48622_c0_g1_i5 1602 1622 TGGGCTGCATAAATCCCGTGA BLAST psRNATarget
Ll_transcript_497149; TRINITY_DN50238_c0_g2_i2 1083 1103 GAAACTGGATAAATCTCATGA BLAST psRNATarget
Ll_transcript_425527; TRINITY_DN43983_c0_g1_i6 351 371 CTAATTGCATACATCCCATGA BLAST psRNATarget
Ll_transcript_470638; TRINITY_DN66679_c0_g1_i1 469 489 CCGACTGTGTAAATCTCATGA BLAST psRNATarget
Ll_transcript_445970; TRINITY_DN51844_c1_g3_i2 1699 1719 AAAACTTCATAGATCCTATGA BLAST psRNATarget
Ll_transcript_366662; TRINITY_DN46360_c0_g5_i1 1759 1779 CTGATTGGATAAATCTTACGA BLAST psRNATarget
Ll_transcript_365332; TRINITY_DN46318_c0_g1_i6 47 67 TGAATTGTATAAAGCCCATGA BLAST psRNATarget
Ll_transcript_365329; TRINITY_DN46318_c0_g1_i3 47 67 TGAATTGTATAAAGCCCATGA BLAST psRNATarget
Ll_transcript_365330; TRINITY_DN46318_c0_g1_i4 47 67 TGAATTGTATAAAGCCCATGA BLAST psRNATarget
Ll_transcript_332869; TRINITY_DN28803_c0_g1_i1 179 199 GGAACTGCAGAAGTTCTACGA BLAST psRNATarget
Ll_transcript_294431; TRINITY_DN53805_c0_g1_i1 12 32 ATAATTGCATTAGTTCCATGA BLAST psRNATarget
Ll_transcript_480148; TRINITY_DN52771_c3_g3_i1 332 352 GTAATTGTGTAAGTTTCGCGA BLAST psRNATarget
Ll_transcript_480153; TRINITY_DN52771_c3_g3_i4 421 441 GTAATTGTGTAAGTTTCGCGA BLAST psRNATarget
Ll_transcript_315742; TRINITY_DN46718_c2_g1_i3 964 984 CTAATTGCAGAAATCCGACGA BLAST psRNATarget
Ll_transcript_315743; TRINITY_DN46718_c2_g1_i4 964 984 CTAATTGCAGAAATCCGACGA BLAST psRNATarget
Ll_transcript_338356; TRINITY_DN48549_c2_g2_i1 153 173 AAGATTGAATAAATTTCATGA BLAST psRNATarget
Ll_transcript_373822; TRINITY_DN68958_c0_g1_i1 23 43 TCTTTTGTATAAATTCCACGA BLAST psRNATarget
Ll_transcript_489696; TRINITY_DN50322_c1_g4_i1 128 148 CTGAGTGCATAAGTTCCATGG BLAST psRNATarget
Ll_transcript_517355; TRINITY_DN51220_c5_g4_i1 342 362 CATGCTGCATGAATTCTATGA BLAST psRNATarget
Ll_transcript_327168; TRINITY_DN48013_c0_g1_i3 726 746 TAAGCTGTATAAATTGCGCGA BLAST psRNATarget
Ll_transcript_346909; TRINITY_DN50484_c0_g1_i4 229 249 TGGATTGCATGAACCCCATGA BLAST psRNATarget
Ll_transcript_418556; TRINITY_DN46093_c0_g1_i2 1876 1896 TGAATTGCATAGATTTTATGG BLAST psRNATarget
Ll_transcript_451448; TRINITY_DN50600_c0_g1_i12 106 126 TCGGCTGCATGAATTCAACGA BLAST psRNATarget
Ll_transcript_346924; TRINITY_DN50484_c0_g1_i12 229 249 TGGATTGCATGAACCCCATGA BLAST psRNATarget
Ll_transcript_327181; TRINITY_DN48013_c0_g1_i13 726 746 TAAGCTGTATAAATTGCGCGA BLAST psRNATarget
Ll_transcript_424249; TRINITY_DN47937_c0_g2_i1 772 792 TAAACTGCATAGCTTCTATGA BLAST psRNATarget
Ll_transcript_327166; TRINITY_DN48013_c0_g1_i1 726 746 TAAGCTGTATAAATTGCGCGA BLAST psRNATarget
Ll_transcript_332216; TRINITY_DN49020_c0_g1_i5 1932 1952 ACCATTGCATGAGTTCCACGG BLAST psRNATarget
Ll_transcript_346906; TRINITY_DN50484_c0_g1_i2 229 249 TGGATTGCATGAACCCCATGA BLAST psRNATarget

Expression of miRNA 269


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)