ta-siRNA 275 details

ID275
SequenceATCAGGTCGCTCTCGTTAAGACGT 

Targets of siRNA 275

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details
Ll_transcript_112335; 633 656 ACGTCTTAATGAGAGCGACCTGGT BLAST
Ll_transcript_112339; 85 108 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_131877; 190 213 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_13518; 168 191 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_85007; 253 276 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_112313; 85 108 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_112309; 85 108 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_112336; 115 138 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_112314; 85 108 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_13514; 18 41 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_50067; 41 64 ACGTCTTAAAGAGAGCGATCTGAT BLAST
Ll_transcript_112333; 115 138 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_112337; 115 138 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_85005; 342 365 ATGTCTTAAAGAGAGCGACTTGAT BLAST
Ll_transcript_85001; 342 365 ATGTCTTAAAGAGAGCGACTTGAT BLAST
Ll_transcript_112331; 85 108 ACATCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_312177; 16 39 ACGTCTTAAAGAGAGCGACCTGAT BLAST
Ll_transcript_455751; 279 302 ACGTCTTAAAGAGAGCGACCTGAT BLAST
Ll_transcript_460534; 275 298 ACGTCTTAATGAGAGCGACCTGGT BLAST
Ll_transcript_460516; 279 302 ACGTCTTAATGAGAGCGACCTGGT BLAST
Ll_transcript_479416; 169 192 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_479417; 129 152 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_449021; 22 45 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_348513; 3 26 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_455744; 279 302 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_479419; 299 322 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_460520; 275 298 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_460528; 279 302 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_286632; 13 36 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_330387; 7 30 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_287908; 39 62 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_460503; 275 298 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_460521; 279 302 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_330384; 7 30 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_330390; 7 30 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_330391; 7 30 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_330385; 7 30 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_533349; 33 56 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_330397; 7 30 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_330388; 7 30 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_533357; 33 56 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_533347; 33 56 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_533350; 33 56 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_533340; 33 56 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_533337; 33 56 ACGTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_348463; 2343 2366 ACGTCTTAAAGAGAGCGATCTGAT BLAST
Ll_transcript_490420; 25 48 ACATCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_490418; 25 48 ACATCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_348465; 90 113 ACATCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_480579; 1 22 GTCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_443528; 1 22 ATCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_443518; 1 22 ATCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_443521; 1 22 ATCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_443531; 1 22 ATCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_443519; 1 22 ATCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_443530; 1 22 ATCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_443517; 1 22 ATCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_443523; 1 22 ATCTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_385482; 1 20 CTTAAAGAGAGCGACCTGGT BLAST
Ll_transcript_490345; 1 19 TTAAAGAGAGCGACCTGGT BLAST

Expression of siRNA 275


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)