Transcript | Ll_transcript_315843 |
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CDS coordinates | 62-2440 (+) |
Peptide sequence | MSKSVTNLSTVTAYHHSHGNNSIYLNSPNSFIFFGQSSTNSNLSCRTTNVAVSVSLSHTTHNTTIYDNENATICKFCEMGHLRKSMELLIKSQKSKLELNTYCSVLQLCAELKSLEDGRRVHSIAISNGMKIEGALGAKLVFMYVNCGDLIEGRRIFDKILNDKVFLWNLIMTEYARIGNYKECLCIFKKMQELGVAGNAFTFTCVLKCFAALGEEMECKRVHGYVYKLGFGSYNAVVNSLLAAYFKYGGVESAYKLFDELSDQDVISWNSMISGCVMNGFSRKGLELFIQMLILGADMDSDTLVSVLVACANVGNLSFGRALHALGVKRCYSGNAVFNNTLLDMYSKCDNLNAAADVFVKMGDKTIVSWTSIIAAYVREGRYDDAIGLFDEMQSKGLKPGVYTVTSIVHACACSNSLDKGREVHDYITKNKMGSSLPVCNALMNMYAKCGSMEEAHIIFSKIPVKDIVSWNTMIGGYSKNSLPNEALYLFVDMQKQSKPDEITMACVLPACSGLSALDKGREIHGHILRKGYFSNPNVLGALVDMYVKCGLLVIAKLLFDMIPKKNLVHWTIMIAGYAMHGFGNEAISTFEKMRKAGIEPDETSFTSVLCACRDSGLQKEGWVFFNYMRRKCSIEPKLEHYVCMVDLLALSGNLSKAYKFIETMPIKPDATIWGALLSGCRIHHDVVLAEKVAEHIFEQEPENTRYYVLLASVYADAEMWENVKKFQEKIRKRGFEKNAGCSWLEVQGKFNIFVAGDKSHPQARMIDSLLKKLQMKMKNEGYSPKMRYALFN |
ORF Type | 3prime_partial |
Blastp | Pentatricopeptide repeat-containing protein DOT4, chloroplastic from Arabidopsis with 53.72% of identity |
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Blastx | Pentatricopeptide repeat-containing protein DOT4, chloroplastic from Arabidopsis with 53.72% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT4G18750) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464352.1) |
Pfam | PPR repeat family (PF13041.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer