miRNA 308 details

Id Micro308
SequenceTGACATGGGACTGCCTAAGCTA 
Annotated namesath-miR848; 
Annotated pre-miRNANone

Targets of miRNA 308

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_161674; FTRINITY_DN73852_c0_g1_i1 20 41 CATCTTGGTCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_240711; FTRINITY_DN53062_c2_g2_i1 99 120 TAACTTAGGCATTTTCATGTCG BLAST psRNATarget
Ll_transcript_272599; FTRINITY_DN54239_c3_g1_i1 427 448 CAATTTTGGCAGTTCCATGTCC BLAST psRNATarget
Ll_transcript_272603; FTRINITY_DN54239_c3_g1_i3 427 448 CAATTTTGGCAGTTCCATGTCC BLAST psRNATarget
Ll_transcript_272609; FTRINITY_DN54239_c3_g1_i7 427 448 CAATTTTGGCAGTTCCATGTCC BLAST psRNATarget
Ll_transcript_272610; FTRINITY_DN54239_c3_g1_i8 427 448 CAATTTTGGCAGTTCCATGTCC BLAST psRNATarget
Ll_transcript_272605; FTRINITY_DN54239_c3_g1_i5 427 448 CAATTTTGGCAGTTCCATGTCC BLAST psRNATarget
Ll_transcript_124184; FTRINITY_DN53777_c0_g1_i13 393 414 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_124170; FTRINITY_DN53777_c0_g1_i1 322 343 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_124178; FTRINITY_DN53777_c0_g1_i7 360 381 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_124182; FTRINITY_DN53777_c0_g1_i11 591 612 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_124172; FTRINITY_DN53777_c0_g1_i3 360 381 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_124171; FTRINITY_DN53777_c0_g1_i2 360 381 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_124173; FTRINITY_DN53777_c0_g1_i4 591 612 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_124180; FTRINITY_DN53777_c0_g1_i9 591 612 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_141343; FTRINITY_DN54043_c3_g1_i1 62 83 TTTTTTCGGGAGTCCCATGTCA BLAST psRNATarget
Ll_transcript_107990; FTRINITY_DN42262_c0_g1_i1 128 149 TAATTTAGGCATTTTTATGTCA BLAST psRNATarget
Ll_transcript_132888; FTRINITY_DN57542_c0_g1_i6 2797 2818 GTGTTTAGGTTGTCTCATGTTA BLAST psRNATarget
Ll_transcript_132883; FTRINITY_DN57542_c0_g1_i1 3169 3190 GTGTTTAGGTTGTCTCATGTTA BLAST psRNATarget
Ll_transcript_132891; FTRINITY_DN57542_c0_g1_i9 2988 3009 GTGTTTAGGTTGTCTCATGTTA BLAST psRNATarget
Ll_transcript_132893; FTRINITY_DN57542_c0_g1_i11 3169 3190 GTGTTTAGGTTGTCTCATGTTA BLAST psRNATarget
Ll_transcript_132884; FTRINITY_DN57542_c0_g1_i2 3169 3190 GTGTTTAGGTTGTCTCATGTTA BLAST psRNATarget
Ll_transcript_132889; FTRINITY_DN57542_c0_g1_i7 3169 3190 GTGTTTAGGTTGTCTCATGTTA BLAST psRNATarget
Ll_transcript_85227; FTRINITY_DN56631_c2_g3_i2 1401 1422 GTTTTTAGGCAATCTCATGTCT BLAST psRNATarget
Ll_transcript_85242; FTRINITY_DN56631_c2_g3_i3 1401 1422 GTTTTTAGGCAATCTCATGTCT BLAST psRNATarget
Ll_transcript_34752; FTRINITY_DN58752_c5_g1_i23 730 751 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_34738; FTRINITY_DN58752_c5_g1_i9 730 751 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_262057; FTRINITY_DN51294_c0_g1_i1 328 349 AACCTTAGCCAGTTTCATGTTC BLAST psRNATarget
Ll_transcript_262058; FTRINITY_DN51294_c0_g1_i2 328 349 AACCTTAGCCAGTTTCATGTTC BLAST psRNATarget
Ll_transcript_34765; FTRINITY_DN58752_c5_g1_i35 1375 1396 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_34734; FTRINITY_DN58752_c5_g1_i5 1527 1548 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_34763; FTRINITY_DN58752_c5_g1_i33 1375 1396 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_34735; FTRINITY_DN58752_c5_g1_i6 1527 1548 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_55811; FTRINITY_DN48087_c0_g1_i1 3015 3036 GATATTAAGCAGTCTCATGTCC BLAST psRNATarget
Ll_transcript_483760; TRINITY_DN49340_c2_g2_i3 284 305 CAATTTTGGCAGTTCCATGTCC BLAST psRNATarget
Ll_transcript_483787; TRINITY_DN49340_c2_g2_i9 284 305 CAATTTTGGCAGTTCCATGTCC BLAST psRNATarget
Ll_transcript_483779; TRINITY_DN49340_c2_g2_i8 284 305 CAATTTTGGCAGTTCCATGTCC BLAST psRNATarget
Ll_transcript_483771; TRINITY_DN49340_c2_g2_i5 284 305 CAATTTTGGCAGTTCCATGTCC BLAST psRNATarget
Ll_transcript_483778; TRINITY_DN49340_c2_g2_i7 284 305 CAATTTTGGCAGTTCCATGTCC BLAST psRNATarget
Ll_transcript_397136; TRINITY_DN51996_c0_g1_i17 1262 1283 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_397115; TRINITY_DN51996_c0_g1_i6 1263 1284 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_397139; TRINITY_DN51996_c0_g1_i18 1189 1210 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_397133; TRINITY_DN51996_c0_g1_i14 1261 1282 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_397113; TRINITY_DN51996_c0_g1_i5 1261 1282 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_397131; TRINITY_DN51996_c0_g1_i12 1624 1645 GGTATTAAGCAGTTTCATGTCA BLAST psRNATarget
Ll_transcript_477724; TRINITY_DN70986_c0_g1_i1 42 63 ATTCTTACGCAGTCACGTGTCA BLAST psRNATarget
Ll_transcript_529073; TRINITY_DN51089_c0_g1_i3 331 352 GTGTTTAGGTTGTCTCATGTTA BLAST psRNATarget
Ll_transcript_529078; TRINITY_DN51089_c0_g1_i7 3168 3189 GTGTTTAGGTTGTCTCATGTTA BLAST psRNATarget
Ll_transcript_529080; TRINITY_DN51089_c0_g1_i9 3168 3189 GTGTTTAGGTTGTCTCATGTTA BLAST psRNATarget
Ll_transcript_529079; TRINITY_DN51089_c0_g1_i8 3168 3189 GTGTTTAGGTTGTCTCATGTTA BLAST psRNATarget
Ll_transcript_330983; TRINITY_DN49029_c5_g3_i3 1274 1295 GTTTTTAGGCAATCTCATGTCT BLAST psRNATarget
Ll_transcript_330995; TRINITY_DN49029_c5_g3_i12 1274 1295 GTTTTTAGGCAATCTCATGTCT BLAST psRNATarget
Ll_transcript_330986; TRINITY_DN49029_c5_g3_i5 1274 1295 GTTTTTAGGCAATCTCATGTCT BLAST psRNATarget
Ll_transcript_330985; TRINITY_DN49029_c5_g3_i4 1274 1295 GTTTTTAGGCAATCTCATGTCT BLAST psRNATarget
Ll_transcript_330989; TRINITY_DN49029_c5_g3_i7 1274 1295 GTTTTTAGGCAATCTCATGTCT BLAST psRNATarget
Ll_transcript_330996; TRINITY_DN49029_c5_g3_i13 1274 1295 GTTTTTAGGCAATCTCATGTCT BLAST psRNATarget
Ll_transcript_330980; TRINITY_DN49029_c5_g3_i1 1274 1295 GTTTTTAGGCAATCTCATGTCT BLAST psRNATarget
Ll_transcript_410133; TRINITY_DN51624_c0_g2_i24 723 744 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_410118; TRINITY_DN51624_c0_g2_i11 729 750 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_524000; TRINITY_DN43091_c0_g1_i2 234 255 AACCTTAGCCAGTTTCATGTTC BLAST psRNATarget
Ll_transcript_410134; TRINITY_DN51624_c0_g2_i25 1374 1395 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_523999; TRINITY_DN43091_c0_g1_i1 234 255 AACCTTAGCCAGTTTCATGTTC BLAST psRNATarget
Ll_transcript_524001; TRINITY_DN43091_c0_g1_i3 234 255 AACCTTAGCCAGTTTCATGTTC BLAST psRNATarget
Ll_transcript_410132; TRINITY_DN51624_c0_g2_i23 1526 1547 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_410117; TRINITY_DN51624_c0_g2_i10 1732 1753 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_410119; TRINITY_DN51624_c0_g2_i12 1869 1890 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_410107; TRINITY_DN51624_c0_g2_i3 1732 1753 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_410122; TRINITY_DN51624_c0_g2_i13 1869 1890 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_410128; TRINITY_DN51624_c0_g2_i19 1732 1753 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_490964; TRINITY_DN50373_c0_g1_i2 3612 3633 GATATTAAGCAGTCTCATGTCC BLAST psRNATarget
Ll_transcript_410125; TRINITY_DN51624_c0_g2_i16 1869 1890 ATCATTGAGCAGTCCCATGTCT BLAST psRNATarget
Ll_transcript_490965; TRINITY_DN50373_c0_g1_i3 4036 4057 GATATTAAGCAGTCTCATGTCC BLAST psRNATarget

Expression of miRNA 308


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)