miRNA 310 details

Id Micro310
SequenceTGAGCAGCCGGACCATGGGAT 
Annotated namesosa-miR5836; 
Annotated pre-miRNANone

Targets of miRNA 310

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_261041; FTRINITY_DN50863_c0_g1_i2 902 922 CTCCCATGGTTCAGTTGTTCA BLAST psRNATarget
Ll_transcript_261040; FTRINITY_DN50863_c0_g1_i1 902 922 CTCCCATGGTTCAGTTGTTCA BLAST psRNATarget
Ll_transcript_274744; FTRINITY_DN54237_c4_g4_i3 353 373 GTCCTACGGTCCGGCAGCTCA BLAST psRNATarget
Ll_transcript_274741; FTRINITY_DN54237_c4_g4_i1 353 373 GTCCTACGGTCCGGCAGCTCA BLAST psRNATarget
Ll_transcript_150300; FTRINITY_DN57638_c0_g1_i5 2387 2407 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_150314; FTRINITY_DN57638_c0_g1_i16 2302 2322 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_150315; FTRINITY_DN57638_c0_g1_i17 2302 2322 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_150310; FTRINITY_DN57638_c0_g1_i13 2302 2322 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_150313; FTRINITY_DN57638_c0_g1_i15 2302 2322 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_150304; FTRINITY_DN57638_c0_g1_i9 2387 2407 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_150307; FTRINITY_DN57638_c0_g1_i12 2302 2322 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_150301; FTRINITY_DN57638_c0_g1_i6 2387 2407 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_150299; FTRINITY_DN57638_c0_g1_i4 2410 2430 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_16399; FTRINITY_DN59214_c2_g10_i1 183 203 CCATCATGATCCGGTTGCTCA BLAST psRNATarget
Ll_transcript_58302; FTRINITY_DN57805_c3_g1_i5 2505 2525 ACCTCATGATCCAGCTGCTCA BLAST psRNATarget
Ll_transcript_58297; FTRINITY_DN57805_c3_g1_i3 2505 2525 ACCTCATGATCCAGCTGCTCA BLAST psRNATarget
Ll_transcript_58298; FTRINITY_DN57805_c3_g1_i4 2505 2525 ACCTCATGATCCAGCTGCTCA BLAST psRNATarget
Ll_transcript_84050; FTRINITY_DN56659_c0_g1_i9 752 772 AGCCCAAGGTTTGGTTGTTCG BLAST psRNATarget
Ll_transcript_84040; FTRINITY_DN56659_c0_g1_i1 1302 1322 AGCCCAAGGTTTGGTTGTTCG BLAST psRNATarget
Ll_transcript_84047; FTRINITY_DN56659_c0_g1_i6 1535 1555 AGCCCAAGGTTTGGTTGTTCG BLAST psRNATarget
Ll_transcript_241420; FTRINITY_DN53023_c4_g4_i4 1557 1577 AACCAATGGTTTGGCTGCTGA BLAST psRNATarget
Ll_transcript_214151; FTRINITY_DN57744_c5_g5_i2 94 114 TACTAATGGTCCAGTTGCTCA BLAST psRNATarget
Ll_transcript_241392; FTRINITY_DN53023_c4_g4_i2 1732 1752 AACCAATGGTTTGGCTGCTGA BLAST psRNATarget
Ll_transcript_84041; FTRINITY_DN56659_c0_g1_i2 2115 2135 AGCCCAAGGTTTGGTTGTTCG BLAST psRNATarget
Ll_transcript_84054; FTRINITY_DN56659_c0_g1_i13 2148 2168 AGCCCAAGGTTTGGTTGTTCG BLAST psRNATarget
Ll_transcript_303382; TRINITY_DN48223_c0_g1_i1 856 876 CTCCCATGGTTCAGTTGTTCA BLAST psRNATarget
Ll_transcript_339301; TRINITY_DN48521_c3_g1_i1 363 383 GTCCTACGGTCCGGCAGCTCA BLAST psRNATarget
Ll_transcript_339308; TRINITY_DN48521_c3_g1_i8 363 383 GTCCTACGGTCCGGCAGCTCA BLAST psRNATarget
Ll_transcript_339304; TRINITY_DN48521_c3_g1_i4 363 383 GTCCTACGGTCCGGCAGCTCA BLAST psRNATarget
Ll_transcript_339307; TRINITY_DN48521_c3_g1_i7 360 380 GTCCTACGGTCCGGCAGCTCA BLAST psRNATarget
Ll_transcript_339310; TRINITY_DN48521_c3_g1_i10 363 383 GTCCTACGGTCCGGCAGCTCA BLAST psRNATarget
Ll_transcript_445820; TRINITY_DN51821_c0_g1_i8 2341 2361 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_445824; TRINITY_DN51821_c0_g1_i12 2183 2203 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_445816; TRINITY_DN51821_c0_g1_i4 2183 2203 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_445813; TRINITY_DN51821_c0_g1_i1 2183 2203 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_445826; TRINITY_DN51821_c0_g1_i14 2362 2382 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_445830; TRINITY_DN51821_c0_g1_i18 2597 2617 ATCTCATAGTTTGGCTGTTTA BLAST psRNATarget
Ll_transcript_480418; TRINITY_DN52738_c1_g5_i1 222 242 CCATCATGATCCGGTTGCTCA BLAST psRNATarget
Ll_transcript_339489; TRINITY_DN55555_c0_g1_i1 58 78 TGCTCATGGTCTGGCTGTGCG BLAST psRNATarget
Ll_transcript_517567; TRINITY_DN51297_c6_g1_i2 5101 5121 ACCTCATGATCCAGCTGCTCA BLAST psRNATarget
Ll_transcript_517572; TRINITY_DN51297_c6_g1_i5 5284 5304 ACCTCATGATCCAGCTGCTCA BLAST psRNATarget
Ll_transcript_386114; TRINITY_DN77906_c0_g1_i1 295 315 CTCACACGGCCCGGCTGCTCA BLAST psRNATarget
Ll_transcript_342674; TRINITY_DN49801_c0_g1_i6 620 640 AGCCCAAGGTTTGGTTGTTCG BLAST psRNATarget
Ll_transcript_342676; TRINITY_DN49801_c0_g1_i8 972 992 AGCCCAAGGTTTGGTTGTTCG BLAST psRNATarget
Ll_transcript_342672; TRINITY_DN49801_c0_g1_i4 1314 1334 AGCCCAAGGTTTGGTTGTTCG BLAST psRNATarget
Ll_transcript_342662; TRINITY_DN49801_c0_g1_i2 1317 1337 AGCCCAAGGTTTGGTTGTTCG BLAST psRNATarget
Ll_transcript_495419; TRINITY_DN43128_c0_g1_i3 1605 1625 AACCAATGGTTTGGCTGCTGA BLAST psRNATarget
Ll_transcript_495416; TRINITY_DN43128_c0_g1_i1 1732 1752 AACCAATGGTTTGGCTGCTGA BLAST psRNATarget

Expression of miRNA 310


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)