miRNA 336 details

Id Micro336
SequenceTGCTCACTGCTCTTTCTGTCAGA 
Annotated namesbra-miR156f-3p; 
Annotated pre-miRNANone

Targets of miRNA 336

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_225926; FTRINITY_DN56144_c1_g2_i7 1206 1228 ACAGACAGATAGAGCAGTGAGTA BLAST psRNATarget
Ll_transcript_225921; FTRINITY_DN56144_c1_g2_i3 1605 1627 ACAGACAGATAGAGCAGTGAGTA BLAST psRNATarget
Ll_transcript_225928; FTRINITY_DN56144_c1_g2_i8 1678 1700 ACAGACAGATAGAGCAGTGAGTA BLAST psRNATarget
Ll_transcript_225923; FTRINITY_DN56144_c1_g2_i4 1791 1813 ACAGACAGATAGAGCAGTGAGTA BLAST psRNATarget
Ll_transcript_204296; FTRINITY_DN56981_c0_g2_i4 909 931 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_204304; FTRINITY_DN56981_c0_g2_i10 909 931 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_204322; FTRINITY_DN56981_c0_g2_i19 993 1015 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_204303; FTRINITY_DN56981_c0_g2_i9 993 1015 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_204299; FTRINITY_DN56981_c0_g2_i6 914 936 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_204317; FTRINITY_DN56981_c0_g2_i16 909 931 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_204295; FTRINITY_DN56981_c0_g2_i3 993 1015 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_204294; FTRINITY_DN56981_c0_g2_i2 1669 1691 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_204313; FTRINITY_DN56981_c0_g2_i14 1669 1691 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_204319; FTRINITY_DN56981_c0_g2_i17 1669 1691 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_63478; FTRINITY_DN55375_c1_g3_i1 579 601 TGGCATAGAGAAAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_63483; FTRINITY_DN55375_c1_g3_i2 605 627 TGGCATAGAGAAAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_65186; FTRINITY_DN55314_c6_g2_i4 775 797 TGGCATAGAGAAAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_65182; FTRINITY_DN55314_c6_g2_i1 775 797 TGGCATAGAGAAAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_65183; FTRINITY_DN55314_c6_g2_i2 987 1009 TGGCATAGAGAAAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_65185; FTRINITY_DN55314_c6_g2_i3 987 1009 TGGCATAGAGAAAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74829; FTRINITY_DN55501_c0_g2_i2 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74840; FTRINITY_DN55501_c0_g2_i12 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74841; FTRINITY_DN55501_c0_g2_i13 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74831; FTRINITY_DN55501_c0_g2_i4 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74838; FTRINITY_DN55501_c0_g2_i11 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74828; FTRINITY_DN55501_c0_g2_i1 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74836; FTRINITY_DN55501_c0_g2_i9 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74837; FTRINITY_DN55501_c0_g2_i10 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74832; FTRINITY_DN55501_c0_g2_i5 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74830; FTRINITY_DN55501_c0_g2_i3 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74833; FTRINITY_DN55501_c0_g2_i6 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74844; FTRINITY_DN55501_c0_g2_i14 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_74835; FTRINITY_DN55501_c0_g2_i8 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_134391; FTRINITY_DN58026_c0_g1_i6 1187 1209 GCTAATAGGAAGAGTAGTGAGAA BLAST psRNATarget
Ll_transcript_26404; FTRINITY_DN51743_c0_g1_i9 996 1018 AATACCAGAAAGAGTAGTGAGTC BLAST psRNATarget
Ll_transcript_26400; FTRINITY_DN51743_c0_g1_i5 680 702 AATACCAGAAAGAGTAGTGAGTC BLAST psRNATarget
Ll_transcript_26407; FTRINITY_DN51743_c0_g1_i12 837 859 AATACCAGAAAGAGTAGTGAGTC BLAST psRNATarget
Ll_transcript_250895; FTRINITY_DN44018_c0_g1_i1 401 423 ACCTACGGAGAGGGCAGTGAGTC BLAST psRNATarget
Ll_transcript_26410; FTRINITY_DN51743_c0_g1_i13 996 1018 AATACCAGAAAGAGTAGTGAGTC BLAST psRNATarget
Ll_transcript_155850; FTRINITY_DN56506_c0_g1_i1 1109 1131 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_155856; FTRINITY_DN56506_c0_g1_i4 1136 1158 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_155851; FTRINITY_DN56506_c0_g1_i2 1155 1177 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_155854; FTRINITY_DN56506_c0_g1_i3 1241 1263 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_132241; FTRINITY_DN57520_c4_g4_i1 1723 1745 ACTGATATAAAGAGGAGTGAGTA BLAST psRNATarget
Ll_transcript_24410; FTRINITY_DN53846_c0_g1_i3 947 969 CGTGACAGAGAGGGTAGGGAGCG BLAST psRNATarget
Ll_transcript_24408; FTRINITY_DN53846_c0_g1_i1 947 969 CGTGACAGAGAGGGTAGGGAGCG BLAST psRNATarget
Ll_transcript_15619; FTRINITY_DN59215_c1_g2_i4 997 1019 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_15620; FTRINITY_DN59215_c1_g2_i5 910 932 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_15622; FTRINITY_DN59215_c1_g2_i7 910 932 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_15618; FTRINITY_DN59215_c1_g2_i3 910 932 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_15621; FTRINITY_DN59215_c1_g2_i6 910 932 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_15616; FTRINITY_DN59215_c1_g2_i2 910 932 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_74230; FTRINITY_DN48588_c0_g1_i1 156 178 TGTGACGATAAGAGCAGTGAGCC BLAST psRNATarget
Ll_transcript_207483; FTRINITY_DN52638_c0_g1_i14 650 672 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget
Ll_transcript_81094; FTRINITY_DN58197_c4_g1_i7 874 896 AGCTGCAGAAGGAGCAGTGAGGG BLAST psRNATarget
Ll_transcript_207479; FTRINITY_DN52638_c0_g1_i12 650 672 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget
Ll_transcript_207477; FTRINITY_DN52638_c0_g1_i10 650 672 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget
Ll_transcript_207471; FTRINITY_DN52638_c0_g1_i4 650 672 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget
Ll_transcript_207475; FTRINITY_DN52638_c0_g1_i8 650 672 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget
Ll_transcript_207478; FTRINITY_DN52638_c0_g1_i11 1249 1271 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget
Ll_transcript_207484; FTRINITY_DN52638_c0_g1_i15 1249 1271 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget
Ll_transcript_207473; FTRINITY_DN52638_c0_g1_i6 1249 1271 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget
Ll_transcript_207476; FTRINITY_DN52638_c0_g1_i9 1249 1271 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget
Ll_transcript_312696; TRINITY_DN46961_c0_g1_i12 1533 1555 ACAGACAGATAGAGCAGTGAGTA BLAST psRNATarget
Ll_transcript_381546; TRINITY_DN51478_c0_g1_i3 984 1006 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_381545; TRINITY_DN51478_c0_g1_i2 984 1006 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_381549; TRINITY_DN51478_c0_g1_i5 1658 1680 TAGGACACGAAGAGCAGTGAGTG BLAST psRNATarget
Ll_transcript_443571; TRINITY_DN47806_c1_g1_i3 715 737 TGGCATAGAGAAAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_443570; TRINITY_DN47806_c1_g1_i2 858 880 TGGCATAGAGAAAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_443563; TRINITY_DN47806_c1_g1_i1 715 737 TGGCATAGAGAAAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_443580; TRINITY_DN47806_c1_g1_i4 858 880 TGGCATAGAGAAAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_500894; TRINITY_DN47305_c4_g6_i2 1 20 GAATGAGAGAGCAGTGAGCA BLAST psRNATarget
Ll_transcript_481376; TRINITY_DN52741_c2_g1_i1 377 399 GCTAATAGGAAGAGTAGTGAGAA BLAST psRNATarget
Ll_transcript_481388; TRINITY_DN52741_c2_g1_i2 1041 1063 GCTAATAGGAAGAGTAGTGAGAA BLAST psRNATarget
Ll_transcript_313009; TRINITY_DN46923_c1_g2_i1 122 144 ATTAACAGAAAGAACAATGAGCA BLAST psRNATarget
Ll_transcript_303973; TRINITY_DN48254_c3_g1_i9 683 705 AATACCAGAAAGAGTAGTGAGTC BLAST psRNATarget
Ll_transcript_303958; TRINITY_DN48254_c3_g1_i3 683 705 AATACCAGAAAGAGTAGTGAGTC BLAST psRNATarget
Ll_transcript_279228; TRINITY_DN50150_c0_g1_i14 1136 1158 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_279230; TRINITY_DN50150_c0_g1_i15 1155 1177 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_303968; TRINITY_DN48254_c3_g1_i7 999 1021 AATACCAGAAAGAGTAGTGAGTC BLAST psRNATarget
Ll_transcript_303972; TRINITY_DN48254_c3_g1_i8 999 1021 AATACCAGAAAGAGTAGTGAGTC BLAST psRNATarget
Ll_transcript_279205; TRINITY_DN50150_c0_g1_i1 1136 1158 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_279222; TRINITY_DN50150_c0_g1_i10 1155 1177 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_303974; TRINITY_DN48254_c3_g1_i10 1400 1422 AATACCAGAAAGAGTAGTGAGTC BLAST psRNATarget
Ll_transcript_303980; TRINITY_DN48254_c3_g1_i15 1400 1422 AATACCAGAAAGAGTAGTGAGTC BLAST psRNATarget
Ll_transcript_303658; TRINITY_DN48222_c0_g1_i6 677 699 AATAACAGAGAGAGTGGTCAGCA BLAST psRNATarget
Ll_transcript_279209; TRINITY_DN50150_c0_g1_i3 1109 1131 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_279231; TRINITY_DN50150_c0_g1_i16 1241 1263 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_279210; TRINITY_DN50150_c0_g1_i4 1109 1131 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_279226; TRINITY_DN50150_c0_g1_i13 1136 1158 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_279217; TRINITY_DN50150_c0_g1_i6 1155 1177 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_279224; TRINITY_DN50150_c0_g1_i11 1241 1263 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_279220; TRINITY_DN50150_c0_g1_i8 1136 1158 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_279212; TRINITY_DN50150_c0_g1_i5 1155 1177 ATGGACGGTAAGGGTGGTGAGCA BLAST psRNATarget
Ll_transcript_303657; TRINITY_DN48222_c0_g1_i5 1052 1074 AATAACAGAGAGAGTGGTCAGCA BLAST psRNATarget
Ll_transcript_303659; TRINITY_DN48222_c0_g1_i7 1080 1102 AATAACAGAGAGAGTGGTCAGCA BLAST psRNATarget
Ll_transcript_303653; TRINITY_DN48222_c0_g1_i1 991 1013 AATAACAGAGAGAGTGGTCAGCA BLAST psRNATarget
Ll_transcript_303668; TRINITY_DN48222_c0_g1_i15 991 1013 AATAACAGAGAGAGTGGTCAGCA BLAST psRNATarget
Ll_transcript_303662; TRINITY_DN48222_c0_g1_i10 1326 1348 AATAACAGAGAGAGTGGTCAGCA BLAST psRNATarget
Ll_transcript_303667; TRINITY_DN48222_c0_g1_i14 1080 1102 AATAACAGAGAGAGTGGTCAGCA BLAST psRNATarget
Ll_transcript_303663; TRINITY_DN48222_c0_g1_i11 1052 1074 AATAACAGAGAGAGTGGTCAGCA BLAST psRNATarget
Ll_transcript_461124; TRINITY_DN51134_c5_g2_i1 401 423 ACTGATATAAAGAGGAGTGAGTA BLAST psRNATarget
Ll_transcript_461132; TRINITY_DN51134_c5_g2_i2 1845 1867 ACTGATATAAAGAGGAGTGAGTA BLAST psRNATarget
Ll_transcript_405088; TRINITY_DN49500_c4_g1_i7 919 941 CGTGACAGAGAGGGTAGGGAGCG BLAST psRNATarget
Ll_transcript_405080; TRINITY_DN49500_c4_g1_i3 940 962 CGTGACAGAGAGGGTAGGGAGCG BLAST psRNATarget
Ll_transcript_463643; TRINITY_DN52673_c0_g1_i8 992 1014 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_463635; TRINITY_DN52673_c0_g1_i1 905 927 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_463642; TRINITY_DN52673_c0_g1_i7 905 927 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_463638; TRINITY_DN52673_c0_g1_i3 905 927 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_463639; TRINITY_DN52673_c0_g1_i4 905 927 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_463641; TRINITY_DN52673_c0_g1_i6 905 927 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_463637; TRINITY_DN52673_c0_g1_i2 905 927 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_463640; TRINITY_DN52673_c0_g1_i5 905 927 TTTAGCAGAGGGAGCAGTGTGTA BLAST psRNATarget
Ll_transcript_377268; TRINITY_DN50706_c3_g1_i1 156 178 TGTGACGATAAGAGCAGTGAGCC BLAST psRNATarget
Ll_transcript_345378; TRINITY_DN50474_c2_g1_i2 633 655 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget
Ll_transcript_345379; TRINITY_DN50474_c2_g1_i3 640 662 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget
Ll_transcript_294868; TRINITY_DN51706_c0_g1_i3 1366 1388 AGCTGCAGAAGGAGCAGTGAGGG BLAST psRNATarget
Ll_transcript_345380; TRINITY_DN50474_c2_g1_i4 633 655 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget
Ll_transcript_345377; TRINITY_DN50474_c2_g1_i1 640 662 GGGGACAGAAGGGGCAGTTAGTG BLAST psRNATarget

Expression of miRNA 336


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)