miRNA 337 details

Id Micro337
SequenceTGCTCACTTCTCTTTCTGTCATC 
Annotated namesmtr-miR156i-3p; 
Annotated pre-miRNANone

Targets of miRNA 337

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_180385; FTRINITY_DN53592_c3_g5_i1 1902 1924 GATTACAGAAAGAGGGGTGGGTA BLAST psRNATarget
Ll_transcript_139655; FTRINITY_DN55215_c4_g5_i4 335 356 TATGACAAGAGAGAAGTGAGCA BLAST psRNATarget
Ll_transcript_139657; FTRINITY_DN55215_c4_g5_i5 335 356 TATGACAAGAGAGAAGTGAGCA BLAST psRNATarget
Ll_transcript_132241; FTRINITY_DN57520_c4_g4_i1 1723 1745 ACTGATATAAAGAGGAGTGAGTA BLAST psRNATarget
Ll_transcript_76416; FTRINITY_DN55561_c4_g2_i6 1041 1063 CAAGACAAAAAGAGAAGTTAGCA BLAST psRNATarget
Ll_transcript_76401; FTRINITY_DN55561_c4_g2_i2 1087 1109 CAAGACAAAAAGAGAAGTTAGCA BLAST psRNATarget
Ll_transcript_76413; FTRINITY_DN55561_c4_g2_i4 2709 2731 CAAGACAAAAAGAGAAGTTAGCA BLAST psRNATarget
Ll_transcript_76415; FTRINITY_DN55561_c4_g2_i5 3355 3377 CAAGACAAAAAGAGAAGTTAGCA BLAST psRNATarget
Ll_transcript_40187; FTRINITY_DN47194_c0_g1_i1 6 28 AGGAACAGAAAGAGGAGTGGGGA BLAST psRNATarget
Ll_transcript_19191; FTRINITY_DN54522_c1_g1_i12 1324 1346 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_19179; FTRINITY_DN54522_c1_g1_i8 1402 1424 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_19165; FTRINITY_DN54522_c1_g1_i5 1982 2004 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_19184; FTRINITY_DN54522_c1_g1_i9 2000 2022 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_19167; FTRINITY_DN54522_c1_g1_i6 2479 2501 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_95926; FTRINITY_DN12399_c0_g1_i1 3 25 GAGGACAAAGAGAGAAGTGAGTC BLAST psRNATarget
Ll_transcript_30195; FTRINITY_DN58439_c2_g10_i1 28 49 TTTGACAGAAAGAGAAGTAGCA BLAST psRNATarget
Ll_transcript_274550; FTRINITY_DN54249_c4_g1_i4 12 34 GATAGCAGATAGAGAAGTGAGAA BLAST psRNATarget
Ll_transcript_274554; FTRINITY_DN54249_c4_g1_i6 12 34 GATAGCAGATAGAGAAGTGAGAA BLAST psRNATarget
Ll_transcript_274545; FTRINITY_DN54249_c4_g1_i2 12 34 GATAGCAGATAGAGAAGTGAGAA BLAST psRNATarget
Ll_transcript_274552; FTRINITY_DN54249_c4_g1_i5 12 34 GATAGCAGATAGAGAAGTGAGAA BLAST psRNATarget
Ll_transcript_274548; FTRINITY_DN54249_c4_g1_i3 12 34 GATAGCAGATAGAGAAGTGAGAA BLAST psRNATarget
Ll_transcript_86580; FTRINITY_DN67407_c0_g1_i1 45 67 TTAGACAGAGAGGGAAGTGGGTT BLAST psRNATarget
Ll_transcript_206296; FTRINITY_DN51121_c1_g2_i1 874 896 TGTGGCAGAAATAGAAGTGACCA BLAST psRNATarget
Ll_transcript_72489; FTRINITY_DN56008_c5_g1_i2 958 980 CTTGACAGGAAGACAGGTGAGCC BLAST psRNATarget
Ll_transcript_72494; FTRINITY_DN56008_c5_g1_i6 1049 1071 CTTGACAGGAAGACAGGTGAGCC BLAST psRNATarget
Ll_transcript_72491; FTRINITY_DN56008_c5_g1_i4 958 980 CTTGACAGGAAGACAGGTGAGCC BLAST psRNATarget
Ll_transcript_72490; FTRINITY_DN56008_c5_g1_i3 958 980 CTTGACAGGAAGACAGGTGAGCC BLAST psRNATarget
Ll_transcript_72495; FTRINITY_DN56008_c5_g1_i7 1049 1071 CTTGACAGGAAGACAGGTGAGCC BLAST psRNATarget
Ll_transcript_61947; FTRINITY_DN29586_c0_g1_i1 296 318 GGCGGCGGAGAGGGGAGTGAGCT BLAST psRNATarget
Ll_transcript_61948; FTRINITY_DN29586_c0_g1_i2 479 501 GGCGGCGGAGAGGGGAGTGAGCT BLAST psRNATarget
Ll_transcript_267591; FTRINITY_DN55858_c1_g1_i12 1574 1596 AGTGAGAGAAAGAGGGGTGAGGA BLAST psRNATarget
Ll_transcript_267588; FTRINITY_DN55858_c1_g1_i10 1686 1708 AGTGAGAGAAAGAGGGGTGAGGA BLAST psRNATarget
Ll_transcript_267592; FTRINITY_DN55858_c1_g1_i13 1714 1736 AGTGAGAGAAAGAGGGGTGAGGA BLAST psRNATarget
Ll_transcript_267586; FTRINITY_DN55858_c1_g1_i8 1831 1853 AGTGAGAGAAAGAGGGGTGAGGA BLAST psRNATarget
Ll_transcript_190379; FTRINITY_DN56707_c4_g1_i10 40 62 TATTATAGAAAGAGAAGTGCGTT BLAST psRNATarget
Ll_transcript_190368; FTRINITY_DN56707_c4_g1_i2 40 62 TATTATAGAAAGAGAAGTGCGTT BLAST psRNATarget
Ll_transcript_315843; TRINITY_DN46747_c1_g6_i1 1911 1933 GATTACAGAAAGAGGGGTGGGTA BLAST psRNATarget
Ll_transcript_292004; TRINITY_DN49134_c3_g5_i2 404 425 TATGACAAGAGAGAAGTGAGCA BLAST psRNATarget
Ll_transcript_461124; TRINITY_DN51134_c5_g2_i1 401 423 ACTGATATAAAGAGGAGTGAGTA BLAST psRNATarget
Ll_transcript_461132; TRINITY_DN51134_c5_g2_i2 1845 1867 ACTGATATAAAGAGGAGTGAGTA BLAST psRNATarget
Ll_transcript_376783; TRINITY_DN47719_c2_g2_i7 268 290 CAAGACAAAAAGAGAAGTTAGCA BLAST psRNATarget
Ll_transcript_376771; TRINITY_DN47719_c2_g2_i3 1026 1048 CAAGACAAAAAGAGAAGTTAGCA BLAST psRNATarget
Ll_transcript_376777; TRINITY_DN47719_c2_g2_i4 1041 1063 CAAGACAAAAAGAGAAGTTAGCA BLAST psRNATarget
Ll_transcript_376768; TRINITY_DN47719_c2_g2_i1 1728 1750 CAAGACAAAAAGAGAAGTTAGCA BLAST psRNATarget
Ll_transcript_295629; TRINITY_DN51712_c1_g1_i2 344 366 TAGAACAGGAAGAGGAGTCAGCA BLAST psRNATarget
Ll_transcript_295638; TRINITY_DN51712_c1_g1_i9 355 377 TAGAACAGGAAGAGGAGTCAGCA BLAST psRNATarget
Ll_transcript_511935; TRINITY_DN46882_c2_g2_i3 1770 1792 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_511938; TRINITY_DN46882_c2_g2_i6 1770 1792 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_511951; TRINITY_DN46882_c2_g2_i12 1867 1889 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_511941; TRINITY_DN46882_c2_g2_i8 1867 1889 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_511931; TRINITY_DN46882_c2_g2_i1 2014 2036 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_511942; TRINITY_DN46882_c2_g2_i9 2111 2133 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_511937; TRINITY_DN46882_c2_g2_i5 2111 2133 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_511944; TRINITY_DN46882_c2_g2_i10 2857 2879 CATGACAGAGAGGGAATTGGGCA BLAST psRNATarget
Ll_transcript_339096; TRINITY_DN48588_c0_g2_i1 240 262 GAGGACAAAGAGAGAAGTGAGTC BLAST psRNATarget
Ll_transcript_439434; TRINITY_DN48383_c4_g1_i6 297 318 TTTGACAGAAAGAGAAGTAGCA BLAST psRNATarget
Ll_transcript_439433; TRINITY_DN48383_c4_g1_i5 297 318 TTTGACAGAAAGAGAAGTAGCA BLAST psRNATarget
Ll_transcript_300635; TRINITY_DN51541_c1_g1_i4 71 93 GATAGCAGATAGAGAAGTGAGAA BLAST psRNATarget
Ll_transcript_300645; TRINITY_DN51541_c1_g1_i10 71 93 GATAGCAGATAGAGAAGTGAGAA BLAST psRNATarget
Ll_transcript_340724; TRINITY_DN60472_c0_g1_i1 80 101 GTTGACAAAAGAGAAGTGGGTA BLAST psRNATarget
Ll_transcript_495581; TRINITY_DN54450_c0_g1_i1 84 106 GAAAACAGAAAAAGAAGTGGGCT BLAST psRNATarget
Ll_transcript_317024; TRINITY_DN44814_c0_g1_i2 941 963 TGTGGCAGAAATAGAAGTGACCA BLAST psRNATarget
Ll_transcript_317021; TRINITY_DN44814_c0_g1_i1 941 963 TGTGGCAGAAATAGAAGTGACCA BLAST psRNATarget
Ll_transcript_411247; TRINITY_DN44987_c0_g1_i4 952 974 CTTGACAGGAAGACAGGTGAGCC BLAST psRNATarget
Ll_transcript_411245; TRINITY_DN44987_c0_g1_i2 952 974 CTTGACAGGAAGACAGGTGAGCC BLAST psRNATarget
Ll_transcript_340669; TRINITY_DN60470_c0_g1_i1 151 173 AGTGACGGATGGAGAAGTAAGCA BLAST psRNATarget
Ll_transcript_478621; TRINITY_DN56186_c0_g1_i1 67 89 GGTTACGGAGAGAGAAGAGAGCT BLAST psRNATarget
Ll_transcript_438952; TRINITY_DN48358_c1_g2_i1 7 29 GATTACATAAAGTGAAGTGAGCC BLAST psRNATarget
Ll_transcript_471326; TRINITY_DN70154_c0_g1_i1 462 484 GGCGGCGGAGAGGGGAGTGAGCT BLAST psRNATarget
Ll_transcript_469598; TRINITY_DN45460_c1_g1_i3 987 1009 AGTGAGAGAAAGAGGGGTGAGGA BLAST psRNATarget
Ll_transcript_469596; TRINITY_DN45460_c1_g1_i1 1244 1266 AGTGAGAGAAAGAGGGGTGAGGA BLAST psRNATarget
Ll_transcript_421839; TRINITY_DN19852_c0_g1_i1 186 208 AGAGACAGAGAGAGAAGAGAGAA BLAST psRNATarget
Ll_transcript_481901; TRINITY_DN61866_c0_g1_i1 215 237 CTAGACAGAAGAAGAAGTGAGGA BLAST psRNATarget
Ll_transcript_440943; TRINITY_DN48336_c3_g2_i2 873 894 GATATAGGAAGAGAAGTGAGGT BLAST psRNATarget
Ll_transcript_394771; TRINITY_DN77800_c0_g1_i1 186 208 TGGGATAGGAAGAGAAGAGAGTG BLAST psRNATarget

Expression of miRNA 337


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)