miRNA 340 details

Id Micro340
SequenceTGGAAGGGGCATGCAGAGGAG 
Annotated namesata-miR528-5p; bdi-miR528-5p; osa-miR528-5p; sbi-miR528; ssp-miR528; zma-miR528a-5p; zma-miR528b-5p; 
Annotated pre-miRNANone

Targets of miRNA 340

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_229455; FTRINITY_DN52798_c0_g1_i1 265 285 GGCCTCTGCATGTCCCTTCCA BLAST psRNATarget
Ll_transcript_93701; FTRINITY_DN54844_c0_g4_i1 34 54 TTCCTCTGCATGTCCCTTCCC BLAST psRNATarget
Ll_transcript_93710; FTRINITY_DN54844_c0_g4_i3 34 54 TTCCTCTGCATGTCCCTTCCC BLAST psRNATarget
Ll_transcript_189353; FTRINITY_DN56760_c3_g1_i3 1431 1451 GCCCTCTGCATGTTTCTTCCA BLAST psRNATarget
Ll_transcript_189344; FTRINITY_DN56760_c3_g1_i2 2305 2325 GCCCTCTGCATGTTTCTTCCA BLAST psRNATarget
Ll_transcript_189342; FTRINITY_DN56760_c3_g1_i1 2305 2325 GCCCTCTGCATGTTTCTTCCA BLAST psRNATarget
Ll_transcript_189349; FTRINITY_DN56760_c3_g5_i2 2608 2628 GCCCTTTGCATGCTTCTTCCA BLAST psRNATarget
Ll_transcript_189347; FTRINITY_DN56760_c3_g5_i1 2942 2962 GCCCTTTGCATGCTTCTTCCA BLAST psRNATarget
Ll_transcript_189350; FTRINITY_DN56760_c3_g5_i3 2608 2628 GCCCTTTGCATGCTTCTTCCA BLAST psRNATarget
Ll_transcript_144300; FTRINITY_DN51961_c0_g1_i12 2673 2693 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_144290; FTRINITY_DN51961_c0_g1_i2 2673 2693 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_144294; FTRINITY_DN51961_c0_g1_i6 2673 2693 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_144299; FTRINITY_DN51961_c0_g1_i11 3217 3237 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_144295; FTRINITY_DN51961_c0_g1_i7 3294 3314 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_144292; FTRINITY_DN51961_c0_g1_i4 3217 3237 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_144291; FTRINITY_DN51961_c0_g1_i3 3294 3314 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_144289; FTRINITY_DN51961_c0_g1_i1 3217 3237 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_144298; FTRINITY_DN51961_c0_g1_i10 3217 3237 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_144301; FTRINITY_DN51961_c0_g1_i13 3217 3237 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_144296; FTRINITY_DN51961_c0_g1_i8 3217 3237 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_56232; FTRINITY_DN57823_c1_g1_i10 87 107 TTTCTCTGCATGCCTTTTTCA BLAST psRNATarget
Ll_transcript_191104; FTRINITY_DN90191_c0_g1_i1 180 200 CTCCGCTGCATGCCCCTTGCA BLAST psRNATarget
Ll_transcript_158782; FTRINITY_DN54797_c5_g4_i2 1153 1173 ATCCTCTTCATGCCCCTCCCA BLAST psRNATarget
Ll_transcript_158792; FTRINITY_DN54797_c5_g4_i4 1153 1173 ATCCTCTTCATGCCCCTCCCA BLAST psRNATarget
Ll_transcript_158785; FTRINITY_DN54797_c5_g4_i3 1153 1173 ATCCTCTTCATGCCCCTCCCA BLAST psRNATarget
Ll_transcript_100634; FTRINITY_DN57159_c2_g2_i6 1456 1476 GGCCTTTGCATGCTCCCTCCA BLAST psRNATarget
Ll_transcript_100616; FTRINITY_DN57159_c2_g2_i3 1500 1520 GGCCTTTGCATGCTCCCTCCA BLAST psRNATarget
Ll_transcript_100638; FTRINITY_DN57159_c2_g2_i8 1537 1557 GGCCTTTGCATGCTCCCTCCA BLAST psRNATarget
Ll_transcript_100644; FTRINITY_DN57159_c2_g2_i11 1590 1610 GGCCTTTGCATGCTCCCTCCA BLAST psRNATarget
Ll_transcript_100645; FTRINITY_DN57159_c2_g2_i12 1726 1746 GGCCTTTGCATGCTCCCTCCA BLAST psRNATarget
Ll_transcript_100614; FTRINITY_DN57159_c2_g2_i2 2301 2321 GGCCTTTGCATGCTCCCTCCA BLAST psRNATarget
Ll_transcript_100640; FTRINITY_DN57159_c2_g2_i10 2391 2411 GGCCTTTGCATGCTCCCTCCA BLAST psRNATarget
Ll_transcript_97914; FTRINITY_DN46324_c0_g1_i1 109 129 CTCCTTTGTATGGTCCTTCCA BLAST psRNATarget
Ll_transcript_122056; FTRINITY_DN53710_c0_g4_i1 462 482 TTCCTTTGCGTGTTCCTTCCT BLAST psRNATarget
Ll_transcript_165356; FTRINITY_DN20450_c0_g1_i1 78 98 TTTTTTTGCATGTCTCTTTCA BLAST psRNATarget
Ll_transcript_146438; FTRINITY_DN59015_c1_g6_i1 1068 1088 TTCCTTTGCATGTCTCTTTTG BLAST psRNATarget
Ll_transcript_217614; FTRINITY_DN56365_c3_g1_i1 28 48 GTTTTCTGTATGTCCCTTCCT BLAST psRNATarget
Ll_transcript_225779; FTRINITY_DN56146_c4_g1_i1 706 726 TTCTTCAGCATGCTTCTTTCA BLAST psRNATarget
Ll_transcript_204631; FTRINITY_DN56972_c0_g4_i9 899 919 TTTTTCTTCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_204625; FTRINITY_DN56972_c0_g4_i3 1039 1059 TTTTTCTTCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_204624; FTRINITY_DN56972_c0_g4_i2 899 919 TTTTTCTTCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_204632; FTRINITY_DN56972_c0_g4_i10 818 838 TTTTTCTTCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_204630; FTRINITY_DN56972_c0_g4_i8 899 919 TTTTTCTTCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_204627; FTRINITY_DN56972_c0_g4_i5 1039 1059 TTTTTCTTCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_204628; FTRINITY_DN56972_c0_g4_i6 899 919 TTTTTCTTCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_253881; FTRINITY_DN48164_c0_g1_i5 714 734 TTACTCTTCATGCCCCTTCCC BLAST psRNATarget
Ll_transcript_253881; FTRINITY_DN48164_c0_g1_i5 778 798 TTACTCTTCATGCCCCTTCCC BLAST psRNATarget
Ll_transcript_253879; FTRINITY_DN48164_c0_g1_i3 1408 1428 TTACTCTTCATGCCCCTTCCC BLAST psRNATarget
Ll_transcript_253879; FTRINITY_DN48164_c0_g1_i3 1472 1492 TTACTCTTCATGCCCCTTCCC BLAST psRNATarget
Ll_transcript_253877; FTRINITY_DN48164_c0_g1_i1 1441 1461 TTACTCTTCATGCCCCTTCCC BLAST psRNATarget
Ll_transcript_253880; FTRINITY_DN48164_c0_g1_i4 1527 1547 TTACTCTTCATGCCCCTTCCC BLAST psRNATarget
Ll_transcript_180595; FTRINITY_DN53501_c1_g3_i1 10 30 ATCCTCTTCATGCCTTTTCTG BLAST psRNATarget
Ll_transcript_180616; FTRINITY_DN53501_c1_g3_i10 10 30 ATCCTCTTCATGCCTTTTCTG BLAST psRNATarget
Ll_transcript_253878; FTRINITY_DN48164_c0_g1_i2 2441 2461 TTACTCTTCATGCCCCTTCCC BLAST psRNATarget
Ll_transcript_220392; FTRINITY_DN52079_c0_g3_i1 89 109 GGCTTCTGCATCCCCCTTCCT BLAST psRNATarget
Ll_transcript_29299; FTRINITY_DN52294_c11_g1_i3 617 637 CTCCTCTGTATGGCTTTTCTA BLAST psRNATarget
Ll_transcript_29301; FTRINITY_DN52294_c11_g1_i5 617 637 CTCCTCTGTATGGCTTTTCTA BLAST psRNATarget
Ll_transcript_159928; FTRINITY_DN54763_c0_g3_i1 132 152 TTCCTCTGCATGCTCCTCCTC BLAST psRNATarget
Ll_transcript_149963; FTRINITY_DN57664_c6_g8_i3 782 802 CTCCTTGGCATGCTCCTTTCC BLAST psRNATarget
Ll_transcript_149956; FTRINITY_DN57664_c6_g8_i2 782 802 CTCCTTGGCATGCTCCTTTCC BLAST psRNATarget
Ll_transcript_149955; FTRINITY_DN57664_c6_g8_i1 782 802 CTCCTTGGCATGCTCCTTTCC BLAST psRNATarget
Ll_transcript_93702; FTRINITY_DN54844_c0_g4_i2 65 85 TTCCTCTGCATGTTCCTACCC BLAST psRNATarget
Ll_transcript_118937; FTRINITY_DN58201_c0_g1_i5 853 873 TTCCTTTGCATGTTTCTTCAA BLAST psRNATarget
Ll_transcript_118935; FTRINITY_DN58201_c0_g1_i3 892 912 TTCCTTTGCATGTTTCTTCAA BLAST psRNATarget
Ll_transcript_111944; FTRINITY_DN55475_c1_g3_i1 268 288 TTTCTTTGCATGTGTCTTCCA BLAST psRNATarget
Ll_transcript_118934; FTRINITY_DN58201_c0_g1_i2 1772 1792 TTCCTTTGCATGTTTCTTCAA BLAST psRNATarget
Ll_transcript_100423; FTRINITY_DN57150_c5_g1_i7 1673 1693 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_111959; FTRINITY_DN55475_c1_g3_i4 268 288 TTTCTTTGCATGTGTCTTCCA BLAST psRNATarget
Ll_transcript_100414; FTRINITY_DN57150_c5_g1_i3 1834 1854 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_118936; FTRINITY_DN58201_c0_g1_i4 2145 2165 TTCCTTTGCATGTTTCTTCAA BLAST psRNATarget
Ll_transcript_100416; FTRINITY_DN57150_c5_g1_i4 1923 1943 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_8776; FTRINITY_DN56826_c4_g6_i1 2201 2221 CTTCTCTTCATGTTTCTTCTA BLAST psRNATarget
Ll_transcript_8781; FTRINITY_DN56826_c4_g6_i2 2202 2222 CTTCTCTTCATGTTTCTTCTA BLAST psRNATarget
Ll_transcript_100417; FTRINITY_DN57150_c5_g1_i5 2368 2388 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_100434; FTRINITY_DN57150_c5_g1_i11 2368 2388 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_100412; FTRINITY_DN57150_c5_g1_i1 2368 2388 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_100413; FTRINITY_DN57150_c5_g1_i2 2457 2477 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_100426; FTRINITY_DN57150_c5_g1_i9 2457 2477 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_100425; FTRINITY_DN57150_c5_g1_i8 2457 2477 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_264753; FTRINITY_DN53653_c6_g4_i8 3830 3850 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_264753; FTRINITY_DN53653_c6_g4_i8 2198 2218 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_264754; FTRINITY_DN53653_c6_g4_i9 4098 4118 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_264754; FTRINITY_DN53653_c6_g4_i9 2198 2218 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_264758; FTRINITY_DN53653_c6_g4_i12 4098 4118 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_264758; FTRINITY_DN53653_c6_g4_i12 2198 2218 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_264776; FTRINITY_DN53653_c6_g4_i22 4170 4190 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_264776; FTRINITY_DN53653_c6_g4_i22 2270 2290 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_264750; FTRINITY_DN53653_c6_g4_i6 4178 4198 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_264750; FTRINITY_DN53653_c6_g4_i6 2198 2218 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_264773; FTRINITY_DN53653_c6_g4_i20 4195 4215 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_264773; FTRINITY_DN53653_c6_g4_i20 2295 2315 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_264764; FTRINITY_DN53653_c6_g4_i18 4471 4491 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_264764; FTRINITY_DN53653_c6_g4_i18 2571 2591 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_264749; FTRINITY_DN53653_c6_g4_i5 4963 4983 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_264749; FTRINITY_DN53653_c6_g4_i5 2198 2218 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_264759; FTRINITY_DN53653_c6_g4_i13 5336 5356 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_52413; FTRINITY_DN89585_c0_g1_i1 536 556 GTCCTTTGTATGTTCCATCCA BLAST psRNATarget
Ll_transcript_42556; FTRINITY_DN54105_c0_g1_i6 1302 1322 ATCCTTTGCAGGTCCTTTCTA BLAST psRNATarget
Ll_transcript_42533; FTRINITY_DN54105_c0_g1_i1 1392 1412 ATCCTTTGCAGGTCCTTTCTA BLAST psRNATarget
Ll_transcript_60654; FTRINITY_DN56287_c0_g1_i1 497 517 TTCTTATGCATGCTCCTTCTT BLAST psRNATarget
Ll_transcript_42540; FTRINITY_DN54105_c0_g1_i2 2095 2115 ATCCTTTGCAGGTCCTTTCTA BLAST psRNATarget
Ll_transcript_42551; FTRINITY_DN54105_c0_g1_i5 2185 2205 ATCCTTTGCAGGTCCTTTCTA BLAST psRNATarget
Ll_transcript_121312; FTRINITY_DN62103_c0_g1_i1 190 210 TTTCTTGGTATGTTCCTTCCA BLAST psRNATarget
Ll_transcript_175960; FTRINITY_DN48935_c0_g2_i1 211 231 TTTCTCTTCATGCTCTTTCTG BLAST psRNATarget
Ll_transcript_248704; FTRINITY_DN55918_c2_g1_i2 68 88 TTCCTCTTCATCCTCCTTTCA BLAST psRNATarget
Ll_transcript_269556; FTRINITY_DN22425_c0_g2_i1 38 58 TTCCTCTTCATTCTCTTTCCA BLAST psRNATarget
Ll_transcript_159827; FTRINITY_DN54716_c0_g2_i4 195 215 CTAATCTGTATGCTCCTTCTA BLAST psRNATarget
Ll_transcript_248703; FTRINITY_DN55918_c2_g1_i1 211 231 TTCTTCTTCATCCCCCTTTCA BLAST psRNATarget
Ll_transcript_59727; FTRINITY_DN56281_c2_g5_i1 425 445 TTTTTCAGCATGTCCCTTTTA BLAST psRNATarget
Ll_transcript_183267; FTRINITY_DN84286_c0_g1_i1 544 564 TTTTATTGCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_59735; FTRINITY_DN56281_c2_g5_i3 551 571 TTTTTCAGCATGTCCCTTTTA BLAST psRNATarget
Ll_transcript_78437; FTRINITY_DN58120_c0_g1_i5 850 870 CTCATCTTCATGCCCCTTCAA BLAST psRNATarget
Ll_transcript_247172; FTRINITY_DN53336_c0_g2_i2 896 916 TTTTGTTGCATGCCCCTTCTG BLAST psRNATarget
Ll_transcript_264774; FTRINITY_DN53653_c6_g4_i21 814 834 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_247203; FTRINITY_DN53336_c0_g2_i11 1034 1054 TTTTGTTGCATGCCCCTTCTG BLAST psRNATarget
Ll_transcript_264777; FTRINITY_DN53653_c6_g4_i23 852 872 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_264761; FTRINITY_DN53653_c6_g4_i15 910 930 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_159821; FTRINITY_DN54716_c0_g2_i3 277 297 CTAATCTGTATGCTCCTTCTA BLAST psRNATarget
Ll_transcript_10846; FTRINITY_DN56812_c5_g2_i4 901 921 CTGTTCAGCATGCCCCTTTTA BLAST psRNATarget
Ll_transcript_10854; FTRINITY_DN56812_c5_g2_i7 634 654 CTGTTCAGCATGCCCCTTTTA BLAST psRNATarget
Ll_transcript_235070; FTRINITY_DN52868_c8_g1_i3 378 398 CTCTTTAACATGCCTCTTCCA BLAST psRNATarget
Ll_transcript_361921; TRINITY_DN48436_c2_g3_i2 358 378 GGTCTTTGCATGTCCCTTCCA BLAST psRNATarget
Ll_transcript_361919; TRINITY_DN48436_c2_g3_i1 296 316 GGTCTTTGCATGTCCCTTCCA BLAST psRNATarget
Ll_transcript_490123; TRINITY_DN50326_c3_g2_i4 2246 2266 GCCCTCTGCATGTTTCTTCCA BLAST psRNATarget
Ll_transcript_490115; TRINITY_DN50326_c3_g2_i2 2246 2266 GCCCTCTGCATGTTTCTTCCA BLAST psRNATarget
Ll_transcript_490111; TRINITY_DN50326_c3_g2_i1 2570 2590 GCCCTTTGCATGCTTCTTCCA BLAST psRNATarget
Ll_transcript_490120; TRINITY_DN50326_c3_g2_i3 2570 2590 GCCCTTTGCATGCTTCTTCCA BLAST psRNATarget
Ll_transcript_309042; TRINITY_DN47159_c0_g2_i3 2342 2362 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_309048; TRINITY_DN47159_c0_g2_i5 2342 2362 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_309054; TRINITY_DN47159_c0_g2_i10 2342 2362 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_309052; TRINITY_DN47159_c0_g2_i8 2342 2362 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_309071; TRINITY_DN47159_c0_g2_i16 2712 2732 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_309067; TRINITY_DN47159_c0_g2_i13 2342 2362 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_309075; TRINITY_DN47159_c0_g2_i18 2712 2732 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_309053; TRINITY_DN47159_c0_g2_i9 2342 2362 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_309049; TRINITY_DN47159_c0_g2_i6 2342 2362 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_309051; TRINITY_DN47159_c0_g2_i7 2342 2362 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_309043; TRINITY_DN47159_c0_g2_i4 2712 2732 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_309074; TRINITY_DN47159_c0_g2_i17 2789 2809 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_309056; TRINITY_DN47159_c0_g2_i11 2712 2732 CTTTTCTGTATGCCCCTTCTA BLAST psRNATarget
Ll_transcript_328437; TRINITY_DN57812_c0_g1_i1 25 45 TTTCTCTGCATGCCTTTTTCA BLAST psRNATarget
Ll_transcript_397321; TRINITY_DN51915_c1_g3_i3 1163 1183 ATCCTCTTCATGCCCCTCCCA BLAST psRNATarget
Ll_transcript_397299; TRINITY_DN51915_c1_g3_i1 1163 1183 ATCCTCTTCATGCCCCTCCCA BLAST psRNATarget
Ll_transcript_397311; TRINITY_DN51915_c1_g3_i2 1163 1183 ATCCTCTTCATGCCCCTCCCA BLAST psRNATarget
Ll_transcript_427744; TRINITY_DN41297_c0_g2_i1 331 351 AACCTTTGCATCCTCCTTCCA BLAST psRNATarget
Ll_transcript_317475; TRINITY_DN60629_c0_g1_i1 423 443 TTCCTTTGCGTGTTCCTTCCT BLAST psRNATarget
Ll_transcript_462347; TRINITY_DN51174_c0_g1_i12 1873 1893 TTCCTTTGCATGTCTCTTTTG BLAST psRNATarget
Ll_transcript_462343; TRINITY_DN51174_c0_g1_i10 1927 1947 TTCCTTTGCATGTCTCTTTTG BLAST psRNATarget
Ll_transcript_462342; TRINITY_DN51174_c0_g1_i9 2484 2504 TTCCTTTGCATGTCTCTTTTG BLAST psRNATarget
Ll_transcript_450348; TRINITY_DN50641_c6_g1_i11 904 924 TTTTTCTTCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_450343; TRINITY_DN50641_c6_g1_i6 904 924 TTTTTCTTCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_450342; TRINITY_DN50641_c6_g1_i5 904 924 TTTTTCTTCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_450349; TRINITY_DN50641_c6_g1_i12 904 924 TTTTTCTTCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_502936; TRINITY_DN78544_c0_g1_i1 28 48 ATCCTCTTCATGCCTTTTCTG BLAST psRNATarget
Ll_transcript_321707; TRINITY_DN42331_c0_g1_i2 1587 1607 TTACTCTTCATGCCCCTTCCC BLAST psRNATarget
Ll_transcript_321706; TRINITY_DN42331_c0_g1_i1 2501 2521 TTACTCTTCATGCCCCTTCCC BLAST psRNATarget
Ll_transcript_502656; TRINITY_DN40193_c0_g1_i3 212 232 GGCTTCTGCATCCCCCTTCCT BLAST psRNATarget
Ll_transcript_427274; TRINITY_DN16727_c0_g1_i1 50 70 TTCCTCTGCATGTTCCTACCC BLAST psRNATarget
Ll_transcript_405892; TRINITY_DN49588_c1_g6_i2 744 764 CTCCTTGGCATGCTCCTTTCC BLAST psRNATarget
Ll_transcript_405890; TRINITY_DN49588_c1_g6_i1 744 764 CTCCTTGGCATGCTCCTTTCC BLAST psRNATarget
Ll_transcript_276738; TRINITY_DN45748_c0_g2_i2 401 421 CTTCTGTGTATGTTCCTTTCA BLAST psRNATarget
Ll_transcript_302501; TRINITY_DN48259_c3_g3_i6 180 200 CTCTTCAGCATGTCCCTCCCA BLAST psRNATarget
Ll_transcript_315082; TRINITY_DN46777_c0_g1_i12 824 844 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_360232; TRINITY_DN47669_c3_g1_i16 157 177 TTTCTTTGCATGTGTCTTCCA BLAST psRNATarget
Ll_transcript_315070; TRINITY_DN46777_c0_g1_i5 912 932 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_315065; TRINITY_DN46777_c0_g1_i1 1050 1070 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_315079; TRINITY_DN46777_c0_g1_i11 1519 1539 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_398979; TRINITY_DN51930_c0_g2_i7 2019 2039 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_398979; TRINITY_DN51930_c0_g2_i7 119 139 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_398984; TRINITY_DN51930_c0_g2_i9 2019 2039 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_398984; TRINITY_DN51930_c0_g2_i9 119 139 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_377832; TRINITY_DN50786_c1_g3_i1 2482 2502 CTTCTCTTCATGTTTCTTCTA BLAST psRNATarget
Ll_transcript_398974; TRINITY_DN51930_c0_g2_i3 2240 2260 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_398974; TRINITY_DN51930_c0_g2_i3 119 139 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_398971; TRINITY_DN51930_c0_g2_i2 2240 2260 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_398971; TRINITY_DN51930_c0_g2_i2 119 139 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_315090; TRINITY_DN46777_c0_g1_i15 1520 1540 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_398977; TRINITY_DN51930_c0_g2_i6 2610 2630 TTCCTCTGCATGCTTTGTTCA BLAST psRNATarget
Ll_transcript_398977; TRINITY_DN51930_c0_g2_i6 119 139 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_315068; TRINITY_DN46777_c0_g1_i3 1744 1764 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_315073; TRINITY_DN46777_c0_g1_i6 1519 1539 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_315091; TRINITY_DN46777_c0_g1_i16 1519 1539 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_315075; TRINITY_DN46777_c0_g1_i7 1519 1539 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_315069; TRINITY_DN46777_c0_g1_i4 1519 1539 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_315088; TRINITY_DN46777_c0_g1_i14 1519 1539 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_315097; TRINITY_DN46777_c0_g1_i18 1745 1765 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_315067; TRINITY_DN46777_c0_g1_i2 1745 1765 TTCCTTTGTATGTGCCTTCTA BLAST psRNATarget
Ll_transcript_283211; TRINITY_DN70076_c0_g1_i1 6 26 ATCCTCTGGATGTCTCTTCCC BLAST psRNATarget
Ll_transcript_287244; TRINITY_DN51353_c2_g3_i1 785 805 GTCCTTTGTATGTTCCATCCA BLAST psRNATarget
Ll_transcript_454111; TRINITY_DN49746_c0_g1_i4 1443 1463 ATCCTTTGCAGGTCCTTTCTA BLAST psRNATarget
Ll_transcript_454107; TRINITY_DN49746_c0_g1_i3 2240 2260 ATCCTTTGCAGGTCCTTTCTA BLAST psRNATarget
Ll_transcript_478553; TRINITY_DN56194_c0_g1_i1 50 70 TTTTATTGCATGCCCTTTTCA BLAST psRNATarget
Ll_transcript_437468; TRINITY_DN48935_c1_g1_i1 92 112 TTCCTCTTCATCCTCCTTTCA BLAST psRNATarget
Ll_transcript_451363; TRINITY_DN50681_c0_g2_i1 228 248 TTTTTCAGCATGTCCCTTTTA BLAST psRNATarget
Ll_transcript_473109; TRINITY_DN52008_c2_g8_i2 363 383 CTGTTCAGCATGCCCCTTTTA BLAST psRNATarget
Ll_transcript_338037; TRINITY_DN48553_c0_g1_i4 67 87 CTCATCTTCATGCCCCTTCAA BLAST psRNATarget
Ll_transcript_427705; TRINITY_DN41277_c0_g1_i3 732 752 CTCTTTAACATGCCTCTTCCA BLAST psRNATarget
Ll_transcript_315045; TRINITY_DN46759_c1_g2_i2 212 232 CTAATCTGTATGCTCCTTCTA BLAST psRNATarget
Ll_transcript_311664; TRINITY_DN47184_c2_g2_i1 891 911 TTTTGTTGCATGCCCCTTCTG BLAST psRNATarget
Ll_transcript_311669; TRINITY_DN47184_c2_g2_i4 896 916 TTTTGTTGCATGCCCCTTCTG BLAST psRNATarget
Ll_transcript_315046; TRINITY_DN46759_c1_g2_i3 277 297 CTAATCTGTATGCTCCTTCTA BLAST psRNATarget
Ll_transcript_389138; TRINITY_DN50957_c0_g1_i29 603 623 CTCAGTTGCATGCTTCTTCCA BLAST psRNATarget
Ll_transcript_389127; TRINITY_DN50957_c0_g1_i18 603 623 CTCAGTTGCATGCTTCTTCCA BLAST psRNATarget
Ll_transcript_389133; TRINITY_DN50957_c0_g1_i24 603 623 CTCAGTTGCATGCTTCTTCCA BLAST psRNATarget
Ll_transcript_398970; TRINITY_DN51930_c0_g2_i1 119 139 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_389132; TRINITY_DN50957_c0_g1_i23 1062 1082 CTCAGTTGCATGCTTCTTCCA BLAST psRNATarget
Ll_transcript_317721; TRINITY_DN36717_c0_g1_i1 143 163 TTCCTCTTTATACCTCTTCCA BLAST psRNATarget
Ll_transcript_398987; TRINITY_DN51930_c0_g2_i11 119 139 TTCTTCGGCATTCCTCTTCCA BLAST psRNATarget
Ll_transcript_331554; TRINITY_DN49003_c0_g1_i2 37 57 CTCATTTTTATGCCCCTTTCA BLAST psRNATarget
Ll_transcript_317723; TRINITY_DN36717_c0_g1_i3 143 163 TTCCTCTTTATACCTCTTCCA BLAST psRNATarget
Ll_transcript_389131; TRINITY_DN50957_c0_g1_i22 603 623 CTCAGTTGCATGCTTCTTCCA BLAST psRNATarget
Ll_transcript_389121; TRINITY_DN50957_c0_g1_i12 1062 1082 CTCAGTTGCATGCTTCTTCCA BLAST psRNATarget
Ll_transcript_389135; TRINITY_DN50957_c0_g1_i26 1062 1082 CTCAGTTGCATGCTTCTTCCA BLAST psRNATarget
Ll_transcript_311668; TRINITY_DN47184_c2_g2_i3 891 911 TTTTGTTGCATGCCCCTTCTG BLAST psRNATarget
Ll_transcript_311683; TRINITY_DN47184_c2_g2_i14 896 916 TTTTGTTGCATGCCCCTTCTG BLAST psRNATarget

Expression of miRNA 340


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)