Protein coding transcript 34157

TranscriptLl_transcript_371153
CDS coordinates617-6571 (+)
Peptide sequenceMDGVNNSNNIRVCPNGDDPVVGDGSYWVDACDDFIDFDVSSIVVTSSCPDQPDNSSNQDFFGGIDQILDSIKNGCGLPLDDNVVDVVVHSDSNSNLTVPISTTPTPLLSNDASSKLQSLTSSEDGFVKNNGLSVGEKHGSDEINGCNKVLNGDEGGIVVGYSEEGRGLNRCRDLVKEHDVDGGEERYSKRARLGNYKNERHYSGRVNYQAKERDRCLSRKRPRDRDEIDRRERDKDGVRKREHCGARRDVRDRDWRDRESRGYWERDKSGTNDMVFRTGSWEADRTREENMANDAKQESNVKVEKTDEETKEKAKEKVPEEKARQYQLDVLEQAKNKNTIAFLETGAGKTLIAVLLIRSIHESLQNQNKKMLAVFLVPKVPLVYQQAEVIRERTGYHVGHYCGEMGQDFWDARRWQREFDSKHVLVMTAQILLNILRHSIIKMEGINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPTVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEVVVEYDKAASLCYLHEQIKQMELEVEEAAKSSSRKSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQAFLAALQNDERANYQLDVKFQESYLSKVVSLLKCQLSEGAASDKNAGVDDSECGAVQQSGSEPEEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQALIKILLKYQHTSDFRAIIFVERVVSALVLPKVFDELPSLGFVKCASLIGHNNSQEMRTHQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHEAFLKNARNSEETLRKEAIQRTDLSHLKDTSRLITVETRPGSVYQVESTGAVVSLNSAVGLIHFFCSQLPSDRYSILRPEFIMEKHEKEGGHTEYSCKLQLPCNAPFENLEGPICCSMRLAQQTVCLAACKKLHEMGAFTDMLLPDKGSGGEKEKTEQNDEDEPLPGTARHREFYPEGVADILKGEWILSGKDACKDTKVLYLCMYALKCENVGDSKDPFLTQVSEFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFRGMVDITESQLASLKSFHVRLMSIVLDVDVEPSTTPWDPSKAYLFVPMVGDNSVDPVKQIDWHLVETIIGANAWKNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPDRDALQKQKNNINLTSKGKLMMADTCADAEDLVGKIVTAAHSGKRFYVDSIRYEMSAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYKQQPLIRGRGVSYCKNLLSPRFEHGEANEGESDEAHDKTYYVFLPPELCLLHPLPGSLVRGAQRLPSIMRRVESMLLAVQLRDMINYPVKASTILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYHFALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGESSLFDQEKSISKTEKMDSHTDGYEDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKTAANHFMSWIGIQIEFDPDEIECARNQFSIPEGILRSVDFDGLEGALNIKFKDKGLLIEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHNLHVHLRHGSSALEKQIREFVKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDNGRDTTSVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYRASRAGNLATVEVFIDGVQVGAAQNPQKKMAQKLAARNALAALKEKEEIKAQEKNDENGKKNGSHTYTRQTLNDICLRKNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDKGWTDECIGEPMPSVKKAKDSAAVLLLELLNKLYS*
ORF Typecomplete

Annotations of Ll_transcript_371153

BlastpEndoribonuclease Dicer homolog 1 from Arabidopsis with 73.45% of identity
BlastxEndoribonuclease Dicer homolog 1 from Arabidopsis with 72.8% of identity
EggnogDigests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571)
KeggLink to kegg annotations (AT1G01040)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432886.1)
PfamType III restriction enzyme, res subunit (PF04851.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


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