ta-siRNA 35 details

ID35
SequenceGTTCGGGTTAGGGTCTTTGCTCT 

Targets of siRNA 35

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_21435; 903 925 AGAGCAAAGACCCTAACCCGAAC BLAST
Ll_transcript_246585; 3728 3750 AGAGCAAAGACCCTAACCCGAAC BLAST
Ll_transcript_227511; 244 266 AGAACAAAGACCCTAACCCGAAC BLAST
Ll_transcript_19135; 426 448 ATAGCAAAGACCCTAACCCGAAC BLAST
Ll_transcript_19152; 426 448 ATAGCAAAGACCCTAACCCGAAC BLAST
Ll_transcript_19127; 426 448 ATAGCAAAGACCCTAACCCGAAC BLAST
Ll_transcript_251675; 40 62 ATAGCAAATACCCTAACCCGAAC BLAST
Ll_transcript_251647; 897 919 AGAGCAAAGACCCTAACCCAAAC BLAST
Ll_transcript_243891; 189 211 AGTGCAAAGACTCTAACCCGAAC BLAST
Ll_transcript_72953; 246 268 GGTGCAAAGACCCTAACCTGAAC BLAST
Ll_transcript_49580; 2148 2170 AGAGCAAAGACCCTAACCCAAAT BLAST
Ll_transcript_49591; 2242 2264 AGAGCAAAGACCCTAACCCAAAT BLAST
Ll_transcript_49583; 2251 2273 AGAGCAAAGACCCTAACCCAAAT BLAST
Ll_transcript_49599; 2282 2304 AGAGCAAAGACCCTAACCCAAAT BLAST
Ll_transcript_49578; 2349 2371 AGAGCAAAGACCCTAACCCAAAT BLAST
Ll_transcript_49588; 2376 2398 AGAGCAAAGACCCTAACCCAAAT BLAST
Ll_transcript_49575; 2443 2465 AGAGCAAAGACCCTAACCCAAAT BLAST
Ll_transcript_49584; 2483 2505 AGAGCAAAGACCCTAACCCAAAT BLAST
Ll_transcript_49614; 2577 2599 AGAGCAAAGACCCTAACCCAAAT BLAST
Ll_transcript_19143; 457 479 AGAGCAAAAACCCGAACCCGAAC BLAST
Ll_transcript_257518; 343 365 ACAGCAAAAACCCTAACCCTAAC BLAST
Ll_transcript_429321; 551 573 AGAGCAAAGACCCTAACCCGAAC BLAST
Ll_transcript_295396; 733 755 AGAGCAAAGACCCTAACCCGAAC BLAST
Ll_transcript_295390; 1032 1054 AGAGCAAAGACCCTAACCCGAAC BLAST
Ll_transcript_295386; 1823 1845 AGAGCAAAGACCCTAACCCGAAC BLAST
Ll_transcript_295389; 1849 1871 AGAGCAAAGACCCTAACCCGAAC BLAST
Ll_transcript_343974; 659 681 ATAGCAAAGACCCTAACCCGAAC BLAST
Ll_transcript_453399; 53 75 AGAGCAAAGTCCCTAACCCGAAC BLAST
Ll_transcript_305941; 243 265 AGAGCAAAAACCCTAACCCGAAC BLAST
Ll_transcript_306841; 127 149 ATAGCAAATACCCTAACCCGAAC BLAST
Ll_transcript_305938; 2521 2543 ATAGCAAATACCCTAACCCGAAC BLAST
Ll_transcript_429332; 695 717 AGAGCAAAGACTCTAACCCGAAC BLAST
Ll_transcript_475782; 288 310 ATAACAAAGATCCTAACCCGAAC BLAST
Ll_transcript_306831; 127 149 ATAGCAAATGCCCTAACCCGAAC BLAST
Ll_transcript_500389; 172 194 AGAGCAAAGACCCTAACCCAAAT BLAST
Ll_transcript_500406; 365 387 AGAGCAAAGACCCTAACCCAAAT BLAST
Ll_transcript_500382; 654 676 AGAGCAAAGACCCTAACCCAAAT BLAST
Ll_transcript_344007; 188 210 AGAGCAAAAACCCGAACCCGAAC BLAST
Ll_transcript_420978; 333 355 ACAGCAAAAACCCTAACCCTAAC BLAST

Expression of siRNA 35


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)