miRNA 351 details

Id Micro351
SequenceTGGAGGCAGCGGTTCATCGATC 
Annotated namesath-miR162a-5p; ath-miR162b-5p; csi-miR162-5p; 
Annotated pre-miRNANone

Targets of miRNA 351

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_189508; FTRINITY_DN56795_c7_g1_i1 151 172 CCTCGATGAACAGCTGCTTTCA BLAST psRNATarget
Ll_transcript_214446; FTRINITY_DN57710_c2_g2_i1 115 136 GACCTATGAACTGTTGTCTTCA BLAST psRNATarget
Ll_transcript_20557; FTRINITY_DN55162_c5_g1_i3 1383 1404 GACCAATGATCCGTTGCCTCCA BLAST psRNATarget
Ll_transcript_20563; FTRINITY_DN55162_c5_g1_i9 1395 1416 GACCAATGATCCGTTGCCTCCA BLAST psRNATarget
Ll_transcript_20568; FTRINITY_DN55162_c5_g1_i12 1624 1645 GACCAATGATCCGTTGCCTCCA BLAST psRNATarget
Ll_transcript_20572; FTRINITY_DN55162_c5_g1_i15 1950 1971 GACCAATGATCCGTTGCCTCCA BLAST psRNATarget
Ll_transcript_20565; FTRINITY_DN55162_c5_g1_i10 1962 1983 GACCAATGATCCGTTGCCTCCA BLAST psRNATarget
Ll_transcript_20561; FTRINITY_DN55162_c5_g1_i7 2191 2212 GACCAATGATCCGTTGCCTCCA BLAST psRNATarget
Ll_transcript_107576; FTRINITY_DN47096_c0_g1_i1 959 980 AAGTGGTGAATTGTTGTCTCCA BLAST psRNATarget
Ll_transcript_147871; FTRINITY_DN85646_c0_g1_i1 49 70 GTTTCATCAACTGCTGCCTCCA BLAST psRNATarget
Ll_transcript_83539; FTRINITY_DN56685_c1_g2_i6 118 139 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_83534; FTRINITY_DN56685_c1_g2_i1 323 344 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_83535; FTRINITY_DN56685_c1_g2_i2 602 623 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_83536; FTRINITY_DN56685_c1_g2_i3 611 632 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_5726; FTRINITY_DN58502_c0_g3_i5 139 160 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_5708; FTRINITY_DN58502_c0_g3_i1 139 160 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_5730; FTRINITY_DN58502_c0_g3_i8 139 160 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_5732; FTRINITY_DN58502_c0_g3_i10 718 739 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_5717; FTRINITY_DN58502_c0_g3_i2 718 739 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_5731; FTRINITY_DN58502_c0_g3_i9 635 656 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_5722; FTRINITY_DN58502_c0_g3_i4 718 739 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_108201; FTRINITY_DN47790_c0_g2_i2 863 884 CGTCGATGAGCCTCAGCCTCCA BLAST psRNATarget
Ll_transcript_262760; FTRINITY_DN53667_c4_g2_i1 453 474 ACTCGGTGAACTGTTGCCTATA BLAST psRNATarget
Ll_transcript_92015; FTRINITY_DN54813_c0_g1_i1 338 359 AAATGGTGAATTGCTGCTTCTG BLAST psRNATarget
Ll_transcript_232072; FTRINITY_DN52345_c2_g4_i6 537 558 TTACGATGAACCGATGACTCCG BLAST psRNATarget
Ll_transcript_232085; FTRINITY_DN52345_c2_g4_i10 503 524 TTACGATGAACCGATGACTCCG BLAST psRNATarget
Ll_transcript_232086; FTRINITY_DN52345_c2_g4_i11 537 558 TTACGATGAACCGATGACTCCG BLAST psRNATarget
Ll_transcript_232060; FTRINITY_DN52345_c2_g4_i2 971 992 TTACGATGAACCGATGACTCCG BLAST psRNATarget
Ll_transcript_170738; FTRINITY_DN57068_c0_g1_i4 1739 1760 TGCCGATGGATCCCTGTTTCCA BLAST psRNATarget
Ll_transcript_170736; FTRINITY_DN57068_c0_g1_i3 1811 1832 TGCCGATGGATCCCTGTTTCCA BLAST psRNATarget
Ll_transcript_170744; FTRINITY_DN57068_c0_g1_i8 1867 1888 TGCCGATGGATCCCTGTTTCCA BLAST psRNATarget
Ll_transcript_170728; FTRINITY_DN57068_c0_g1_i1 2343 2364 TGCCGATGGATCCCTGTTTCCA BLAST psRNATarget
Ll_transcript_362281; TRINITY_DN48415_c5_g1_i1 503 524 GACCTATGAACTGTTGTCTTCA BLAST psRNATarget
Ll_transcript_434257; TRINITY_DN46610_c2_g3_i1 1034 1055 GACCAATGATCCGTTGCCTCCA BLAST psRNATarget
Ll_transcript_434262; TRINITY_DN46610_c2_g3_i3 1601 1622 GACCAATGATCCGTTGCCTCCA BLAST psRNATarget
Ll_transcript_434271; TRINITY_DN46610_c2_g3_i5 1725 1746 GACCAATGATCCGTTGCCTCCA BLAST psRNATarget
Ll_transcript_295873; TRINITY_DN51721_c1_g1_i10 234 255 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_295882; TRINITY_DN51721_c1_g1_i18 234 255 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_295865; TRINITY_DN51721_c1_g1_i3 614 635 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_295881; TRINITY_DN51721_c1_g1_i17 234 255 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_295866; TRINITY_DN51721_c1_g1_i4 234 255 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_295875; TRINITY_DN51721_c1_g1_i11 234 255 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_295880; TRINITY_DN51721_c1_g1_i16 234 255 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_295868; TRINITY_DN51721_c1_g1_i6 234 255 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_295863; TRINITY_DN51721_c1_g1_i1 234 255 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_295879; TRINITY_DN51721_c1_g1_i15 234 255 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_295877; TRINITY_DN51721_c1_g1_i13 234 255 GATCGATGAACTGTTGTTTTTG BLAST psRNATarget
Ll_transcript_428502; TRINITY_DN42024_c0_g1_i1 920 941 CGTCGATGAGCCTCAGCCTCCA BLAST psRNATarget
Ll_transcript_340442; TRINITY_DN67854_c0_g1_i1 503 524 ACTCGGTGAACTGTTGCCTATA BLAST psRNATarget
Ll_transcript_448728; TRINITY_DN33317_c0_g1_i1 195 216 ACTCGGAGAGCTGCTGCTTCCG BLAST psRNATarget
Ll_transcript_431830; TRINITY_DN52106_c1_g5_i1 25 46 AAATGGTGAATTGCTGCTTCTG BLAST psRNATarget
Ll_transcript_314596; TRINITY_DN46764_c0_g2_i4 548 569 TTACGATGAACCGATGACTCCG BLAST psRNATarget
Ll_transcript_314600; TRINITY_DN46764_c0_g2_i6 520 541 TTACGATGAACCGATGACTCCG BLAST psRNATarget
Ll_transcript_447916; TRINITY_DN51879_c1_g1_i4 177 198 TGCCGATGGATCCCTGTTTCCA BLAST psRNATarget
Ll_transcript_314589; TRINITY_DN46764_c0_g2_i2 548 569 TTACGATGAACCGATGACTCCG BLAST psRNATarget
Ll_transcript_447911; TRINITY_DN51879_c1_g1_i1 553 574 TGCCGATGGATCCCTGTTTCCA BLAST psRNATarget

Expression of miRNA 351


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)