miRNA 352 details

Id Micro352
SequenceTGGATCGCTTCGTCTGATGGT 
Annotated namesosa-miR5506; 
Annotated pre-miRNANone

Targets of miRNA 352

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_156292; FTRINITY_DN56547_c3_g1_i3 2384 2404 CACAACAGATGAAGCGATCTG BLAST psRNATarget
Ll_transcript_156277; FTRINITY_DN56547_c3_g1_i2 2384 2404 CACAACAGATGAAGCGATCTG BLAST psRNATarget
Ll_transcript_156268; FTRINITY_DN56547_c3_g1_i1 2384 2404 CACAACAGATGAAGCGATCTG BLAST psRNATarget
Ll_transcript_230857; FTRINITY_DN52375_c4_g2_i2 101 121 TACATCAGATGATGCGGTCTA BLAST psRNATarget
Ll_transcript_63041; FTRINITY_DN61959_c0_g1_i1 27 47 CGCATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_234654; FTRINITY_DN52836_c6_g6_i1 256 276 TACATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_250786; FTRINITY_DN55907_c3_g4_i3 59 79 CGCATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_141483; FTRINITY_DN54046_c4_g1_i5 42 62 CGCATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_141484; FTRINITY_DN54046_c4_g1_i6 42 62 CGCATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_250780; FTRINITY_DN55907_c3_g4_i1 59 79 CGCATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_141479; FTRINITY_DN54046_c4_g1_i1 42 62 CGCATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_250799; FTRINITY_DN55907_c3_g4_i8 59 79 CGCATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_81358; FTRINITY_DN58190_c2_g4_i15 1304 1324 TGCATCAGGTGATGTGATCCA BLAST psRNATarget
Ll_transcript_81350; FTRINITY_DN58190_c2_g4_i11 1375 1395 TGCATCAGGTGATGTGATCCA BLAST psRNATarget
Ll_transcript_81343; FTRINITY_DN58190_c2_g4_i6 1494 1514 TGCATCAGGTGATGTGATCCA BLAST psRNATarget
Ll_transcript_224207; FTRINITY_DN53152_c2_g1_i1 1355 1375 CACATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_81346; FTRINITY_DN58190_c2_g4_i8 1565 1585 TGCATCAGGTGATGTGATCCA BLAST psRNATarget
Ll_transcript_230860; FTRINITY_DN52375_c4_g2_i3 1591 1611 TACATCAGATGATGCGGTCTA BLAST psRNATarget
Ll_transcript_254959; FTRINITY_DN59114_c2_g5_i1 167 187 GGCTTTAGACGAAGCGGTTCG BLAST psRNATarget
Ll_transcript_246532; FTRINITY_DN53369_c5_g1_i12 385 405 GATATTATATGAAGCGATCTA BLAST psRNATarget
Ll_transcript_254960; FTRINITY_DN59114_c2_g5_i2 889 909 GGCTTTAGACGAAGCGGTTCG BLAST psRNATarget
Ll_transcript_213486; FTRINITY_DN57783_c0_g1_i1 215 236 ACCATCAAGACGAAGCGAACCA BLAST psRNATarget
Ll_transcript_21128; FTRINITY_DN55100_c8_g1_i2 359 379 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_21125; FTRINITY_DN55100_c8_g2_i1 636 656 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_21147; FTRINITY_DN55100_c8_g2_i6 684 704 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_21135; FTRINITY_DN55100_c8_g2_i3 530 550 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_21129; FTRINITY_DN55100_c8_g2_i2 636 656 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_21146; FTRINITY_DN55100_c8_g2_i5 684 704 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_21140; FTRINITY_DN55100_c8_g2_i4 750 770 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_21132; FTRINITY_DN55100_c8_g1_i3 605 625 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_21124; FTRINITY_DN55100_c8_g1_i1 605 625 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_3332; FTRINITY_DN43787_c0_g2_i2 539 559 ATTATCAGACTGGGCGATCTA BLAST psRNATarget
Ll_transcript_3331; FTRINITY_DN43787_c0_g2_i1 613 633 ATTATCAGACTGGGCGATCTA BLAST psRNATarget
Ll_transcript_75303; FTRINITY_DN55558_c5_g2_i1 147 167 ATCATCACATGATGCGGTCCA BLAST psRNATarget
Ll_transcript_75313; FTRINITY_DN55558_c5_g2_i2 147 167 ATCATCACATGATGCGGTCCA BLAST psRNATarget
Ll_transcript_93236; FTRINITY_DN54824_c1_g2_i8 5264 5284 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_93238; FTRINITY_DN54824_c1_g2_i9 5326 5346 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_123064; FTRINITY_DN53784_c0_g1_i2 270 290 CTCATCAGTCGAAGTGATTCC BLAST psRNATarget
Ll_transcript_123063; FTRINITY_DN53784_c0_g1_i1 270 290 CTCATCAGTCGAAGTGATTCC BLAST psRNATarget
Ll_transcript_93232; FTRINITY_DN54824_c1_g2_i5 6058 6078 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_93258; FTRINITY_DN54824_c1_g2_i18 6173 6193 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_93242; FTRINITY_DN54824_c1_g2_i11 6235 6255 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_93261; FTRINITY_DN54824_c1_g2_i19 6252 6272 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_93227; FTRINITY_DN54824_c1_g2_i3 6522 6542 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_93248; FTRINITY_DN54824_c1_g2_i14 6549 6569 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_93243; FTRINITY_DN54824_c1_g2_i12 6611 6631 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_93252; FTRINITY_DN54824_c1_g2_i15 6898 6918 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_159678; FTRINITY_DN54743_c0_g3_i1 603 623 CTCATCAGTCGAAGTGATTCC BLAST psRNATarget
Ll_transcript_159714; FTRINITY_DN54743_c0_g3_i7 543 563 CTCATCAGTCGAAGTGATTCC BLAST psRNATarget
Ll_transcript_159686; FTRINITY_DN54743_c0_g3_i4 554 574 CTCATCAGTCGAAGTGATTCC BLAST psRNATarget
Ll_transcript_159682; FTRINITY_DN54743_c0_g3_i3 1598 1618 CTCATCAGTCGAAGTGATTCC BLAST psRNATarget
Ll_transcript_159689; FTRINITY_DN54743_c0_g3_i5 1598 1618 CTCATCAGTCGAAGTGATTCC BLAST psRNATarget
Ll_transcript_218834; FTRINITY_DN56330_c3_g3_i4 51 71 TTCATCAGAAGAATCGGTCCA BLAST psRNATarget
Ll_transcript_160651; FTRINITY_DN46015_c0_g1_i1 223 243 GACGTTAGACGAGGCAATTCA BLAST psRNATarget
Ll_transcript_58561; FTRINITY_DN57854_c3_g4_i1 235 255 CGCATCAGATGATGCGGTTCG BLAST psRNATarget
Ll_transcript_503058; TRINITY_DN53300_c0_g1_i1 38 58 ATCATCACACGGAGCGATCTA BLAST psRNATarget
Ll_transcript_437129; TRINITY_DN48906_c0_g1_i10 2443 2463 CACAACAGATGAAGCGATCTG BLAST psRNATarget
Ll_transcript_437120; TRINITY_DN48906_c0_g1_i1 2443 2463 CACAACAGATGAAGCGATCTG BLAST psRNATarget
Ll_transcript_437121; TRINITY_DN48906_c0_g1_i2 2443 2463 CACAACAGATGAAGCGATCTG BLAST psRNATarget
Ll_transcript_437130; TRINITY_DN48906_c0_g1_i11 2443 2463 CACAACAGATGAAGCGATCTG BLAST psRNATarget
Ll_transcript_437122; TRINITY_DN48906_c0_g1_i3 2443 2463 CACAACAGATGAAGCGATCTG BLAST psRNATarget
Ll_transcript_447908; TRINITY_DN51829_c1_g2_i18 67 87 CGCATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_447891; TRINITY_DN51829_c1_g2_i3 65 85 CGCATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_474928; TRINITY_DN47451_c0_g3_i2 42 62 CGCATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_421953; TRINITY_DN47973_c3_g2_i9 1306 1326 TGCATCAGGTGATGTGATCCA BLAST psRNATarget
Ll_transcript_421955; TRINITY_DN47973_c3_g2_i11 1335 1355 TGCATCAGGTGATGTGATCCA BLAST psRNATarget
Ll_transcript_435733; TRINITY_DN48960_c3_g1_i1 1359 1379 CACATCAGGTGATGCGGTCCA BLAST psRNATarget
Ll_transcript_388881; TRINITY_DN50921_c5_g2_i1 2492 2512 TACATCAGATGATGCGGTCTA BLAST psRNATarget
Ll_transcript_437402; TRINITY_DN48913_c2_g2_i1 1490 1510 GGCTTTAGACGAAGCGGTTCG BLAST psRNATarget
Ll_transcript_341878; TRINITY_DN49855_c2_g1_i1 1281 1301 GATATTATATGAAGCGATCTA BLAST psRNATarget
Ll_transcript_437420; TRINITY_DN48913_c2_g2_i9 1723 1743 GGCTTTAGACGAAGCGGTTCG BLAST psRNATarget
Ll_transcript_437409; TRINITY_DN48913_c2_g2_i5 1729 1749 GGCTTTAGACGAAGCGGTTCG BLAST psRNATarget
Ll_transcript_437412; TRINITY_DN48913_c2_g2_i7 1962 1982 GGCTTTAGACGAAGCGGTTCG BLAST psRNATarget
Ll_transcript_437416; TRINITY_DN48913_c2_g2_i8 2212 2232 GGCTTTAGACGAAGCGGTTCG BLAST psRNATarget
Ll_transcript_437411; TRINITY_DN48913_c2_g2_i6 2445 2465 GGCTTTAGACGAAGCGGTTCG BLAST psRNATarget
Ll_transcript_437407; TRINITY_DN48913_c2_g2_i4 2451 2471 GGCTTTAGACGAAGCGGTTCG BLAST psRNATarget
Ll_transcript_437404; TRINITY_DN48913_c2_g2_i2 2684 2704 GGCTTTAGACGAAGCGGTTCG BLAST psRNATarget
Ll_transcript_515358; TRINITY_DN50862_c0_g1_i3 816 837 ACCATCAAGACGAAGCGAACCA BLAST psRNATarget
Ll_transcript_515366; TRINITY_DN50862_c0_g1_i7 906 927 ACCATCAAGACGAAGCGAACCA BLAST psRNATarget
Ll_transcript_515361; TRINITY_DN50862_c0_g1_i4 1043 1064 ACCATCAAGACGAAGCGAACCA BLAST psRNATarget
Ll_transcript_337730; TRINITY_DN48579_c1_g2_i4 103 123 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_356522; TRINITY_DN45817_c1_g1_i4 612 632 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_356520; TRINITY_DN45817_c1_g2_i1 497 517 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_337727; TRINITY_DN48579_c1_g2_i3 103 123 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_337739; TRINITY_DN48579_c1_g3_i4 681 701 ACAATCAGAGGGAGCGATCTA BLAST psRNATarget
Ll_transcript_495485; TRINITY_DN43120_c0_g1_i2 558 578 ATTATCAGACTGGGCGATCTA BLAST psRNATarget
Ll_transcript_495487; TRINITY_DN43120_c0_g1_i4 632 652 ATTATCAGACTGGGCGATCTA BLAST psRNATarget
Ll_transcript_495484; TRINITY_DN43120_c0_g1_i1 651 671 ATTATCAGACTGGGCGATCTA BLAST psRNATarget
Ll_transcript_524601; TRINITY_DN39802_c1_g1_i1 16 36 ATCATCACATGATGCGGTCCA BLAST psRNATarget
Ll_transcript_440516; TRINITY_DN48322_c2_g1_i1 222 242 CTCATCAGTCGAAGTGATTCC BLAST psRNATarget
Ll_transcript_368772; TRINITY_DN48644_c4_g1_i5 4122 4142 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_368777; TRINITY_DN48644_c4_g1_i10 4122 4142 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_368780; TRINITY_DN48644_c4_g1_i13 4122 4142 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_368771; TRINITY_DN48644_c4_g1_i4 4737 4757 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_368774; TRINITY_DN48644_c4_g1_i7 4799 4819 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_368775; TRINITY_DN48644_c4_g1_i8 4872 4892 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_368773; TRINITY_DN48644_c4_g1_i6 4737 4757 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_368784; TRINITY_DN48644_c4_g1_i17 4799 4819 GCTATCATACCAAGTGATCCA BLAST psRNATarget
Ll_transcript_413997; TRINITY_DN49638_c0_g1_i3 1599 1619 CTCATCAGTCGAAGTGATTCC BLAST psRNATarget
Ll_transcript_413995; TRINITY_DN49638_c0_g1_i1 1875 1895 CTCATCAGTCGAAGTGATTCC BLAST psRNATarget
Ll_transcript_522424; TRINITY_DN46542_c0_g1_i1 49 69 TTCATCAGAAGAATCGGTCCA BLAST psRNATarget
Ll_transcript_306302; TRINITY_DN52206_c4_g8_i1 467 487 TGCATCAGGTGATGCGGTCCG BLAST psRNATarget
Ll_transcript_356337; TRINITY_DN45801_c2_g1_i4 136 156 CGCATCAGATGATGCGGTTCG BLAST psRNATarget
Ll_transcript_392261; TRINITY_DN45937_c2_g5_i1 790 810 GACGTTAGACGAGGCAATTCA BLAST psRNATarget
Ll_transcript_362935; TRINITY_DN48423_c5_g1_i3 47 67 TGCATCAGGTGATGCGGTCCG BLAST psRNATarget
Ll_transcript_356326; TRINITY_DN45801_c2_g1_i1 136 156 CGCATCAGATGATGCGGTTCG BLAST psRNATarget
Ll_transcript_362938; TRINITY_DN48423_c5_g1_i6 47 67 TGCATCAGGTGATGCGGTCCG BLAST psRNATarget
Ll_transcript_338449; TRINITY_DN48583_c2_g1_i12 2928 2948 CACATCAGACGGAGTGCTTTA BLAST psRNATarget
Ll_transcript_338457; TRINITY_DN48583_c2_g1_i19 2613 2633 CACATCAGACGGAGTGCTTTA BLAST psRNATarget
Ll_transcript_338451; TRINITY_DN48583_c2_g1_i14 2744 2764 CACATCAGACGGAGTGCTTTA BLAST psRNATarget
Ll_transcript_338458; TRINITY_DN48583_c2_g1_i20 2613 2633 CACATCAGACGGAGTGCTTTA BLAST psRNATarget
Ll_transcript_338440; TRINITY_DN48583_c2_g1_i4 2744 2764 CACATCAGACGGAGTGCTTTA BLAST psRNATarget
Ll_transcript_338453; TRINITY_DN48583_c2_g1_i16 3259 3279 CACATCAGACGGAGTGCTTTA BLAST psRNATarget
Ll_transcript_338446; TRINITY_DN48583_c2_g1_i9 3390 3410 CACATCAGACGGAGTGCTTTA BLAST psRNATarget
Ll_transcript_338460; TRINITY_DN48583_c2_g1_i22 3259 3279 CACATCAGACGGAGTGCTTTA BLAST psRNATarget
Ll_transcript_338448; TRINITY_DN48583_c2_g1_i11 3390 3410 CACATCAGACGGAGTGCTTTA BLAST psRNATarget
Ll_transcript_338452; TRINITY_DN48583_c2_g1_i15 3832 3852 CACATCAGACGGAGTGCTTTA BLAST psRNATarget

Expression of miRNA 352


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)