miRNA 360 details

Id Micro360
SequenceTGTGTTCCCAGGTCGCCCCTG 
Annotated namesatr-miR398; 
Annotated pre-miRNANone

Targets of miRNA 360

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_44480; FTRINITY_DN54194_c0_g2_i4 602 622 CAGGGGCGACCTGAGAACACA BLAST psRNATarget
Ll_transcript_44478; FTRINITY_DN54194_c0_g4_i5 3946 3966 CAGGGGCGACCTGAGAACACG BLAST psRNATarget
Ll_transcript_44490; FTRINITY_DN54194_c0_g4_i9 4283 4303 CAGGGGCGACCTGAGAACACG BLAST psRNATarget
Ll_transcript_44484; FTRINITY_DN54194_c0_g4_i7 4367 4387 CAGGGGCGACCTGAGAACACG BLAST psRNATarget
Ll_transcript_123822; FTRINITY_DN53756_c1_g3_i2 1505 1525 TCAATGCGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_123798; FTRINITY_DN53756_c1_g3_i1 1705 1725 TCAATGCGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_81763; FTRINITY_DN49840_c1_g1_i5 605 625 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_81769; FTRINITY_DN49840_c1_g1_i11 713 733 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_81759; FTRINITY_DN49840_c1_g1_i1 723 743 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_81764; FTRINITY_DN49840_c1_g1_i6 766 786 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_81768; FTRINITY_DN49840_c1_g1_i10 788 808 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_81762; FTRINITY_DN49840_c1_g1_i4 1132 1152 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_81766; FTRINITY_DN49840_c1_g1_i8 1142 1162 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_81761; FTRINITY_DN49840_c1_g1_i3 1185 1205 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_81765; FTRINITY_DN49840_c1_g1_i7 1216 1236 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_81760; FTRINITY_DN49840_c1_g1_i2 1291 1311 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_81767; FTRINITY_DN49840_c1_g1_i9 1635 1655 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_222780; FTRINITY_DN53191_c4_g4_i1 502 522 GAGAGGTGACTTGGGAAGACA BLAST psRNATarget
Ll_transcript_222781; FTRINITY_DN53191_c4_g4_i2 591 611 GAGAGGTGACTTGGGAAGACA BLAST psRNATarget
Ll_transcript_34960; FTRINITY_DN58733_c0_g1_i4 1412 1432 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_250603; FTRINITY_DN55940_c1_g4_i1 2055 2075 AAGGGACGGCTTAGGAACACA BLAST psRNATarget
Ll_transcript_34959; FTRINITY_DN58733_c0_g1_i3 1492 1512 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_34970; FTRINITY_DN58733_c0_g1_i8 1492 1512 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_34989; FTRINITY_DN58733_c0_g1_i18 1540 1560 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_34975; FTRINITY_DN58733_c0_g1_i12 1559 1579 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_34971; FTRINITY_DN58733_c0_g1_i9 1620 1640 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_34976; FTRINITY_DN58733_c0_g1_i13 1636 1656 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_34983; FTRINITY_DN58733_c0_g1_i16 1687 1707 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_34972; FTRINITY_DN58733_c0_g1_i10 1687 1707 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_222786; FTRINITY_DN53191_c4_g4_i5 1803 1823 GAGAGGTGACTTGGGAAGACA BLAST psRNATarget
Ll_transcript_34974; FTRINITY_DN58733_c0_g1_i11 1764 1784 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_41166; FTRINITY_DN60690_c0_g1_i1 4 24 GAGGGTCCACTTGGGAGCGCA BLAST psRNATarget
Ll_transcript_18081; FTRINITY_DN54565_c1_g2_i6 1612 1632 TTCAGCTGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_18080; FTRINITY_DN54565_c1_g2_i5 2342 2362 TTCAGCTGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_18079; FTRINITY_DN54565_c1_g2_i4 2529 2549 TTCAGCTGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_117161; FTRINITY_DN50902_c0_g1_i1 83 103 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_117170; FTRINITY_DN50902_c0_g1_i8 83 103 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_117163; FTRINITY_DN50902_c0_g1_i2 235 255 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_117168; FTRINITY_DN50902_c0_g1_i6 83 103 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_117169; FTRINITY_DN50902_c0_g1_i7 83 103 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_117164; FTRINITY_DN50902_c0_g1_i3 235 255 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_117171; FTRINITY_DN50902_c0_g1_i9 235 255 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_147078; FTRINITY_DN59057_c0_g1_i1 706 726 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_147097; FTRINITY_DN59057_c0_g1_i9 706 726 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_214644; FTRINITY_DN57756_c2_g2_i8 422 442 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_214633; FTRINITY_DN57756_c2_g2_i1 587 607 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_214634; FTRINITY_DN57756_c2_g2_i2 627 647 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_214648; FTRINITY_DN57756_c2_g2_i12 701 721 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_214655; FTRINITY_DN57756_c2_g2_i19 734 754 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_214656; FTRINITY_DN57756_c2_g2_i20 465 485 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_214653; FTRINITY_DN57756_c2_g2_i17 465 485 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_214654; FTRINITY_DN57756_c2_g2_i18 900 920 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_214650; FTRINITY_DN57756_c2_g2_i14 900 920 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_422606; TRINITY_DN47985_c1_g5_i1 184 204 CAGGGGCGACCTGAGAACACA BLAST psRNATarget
Ll_transcript_422598; TRINITY_DN47985_c1_g2_i1 2203 2223 CAGGGGCGACCTGAGAACACG BLAST psRNATarget
Ll_transcript_422607; TRINITY_DN47985_c1_g2_i3 2414 2434 CAGGGGCGACCTGAGAACACG BLAST psRNATarget
Ll_transcript_422602; TRINITY_DN47985_c1_g2_i2 3145 3165 CAGGGGCGACCTGAGAACACG BLAST psRNATarget
Ll_transcript_533128; TRINITY_DN50040_c1_g7_i2 1350 1370 TCAATGCGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_533125; TRINITY_DN50040_c1_g7_i1 1350 1370 TCAATGCGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_503581; TRINITY_DN42195_c0_g2_i4 776 796 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_503579; TRINITY_DN42195_c0_g2_i2 996 1016 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_503580; TRINITY_DN42195_c0_g2_i3 1195 1215 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_503578; TRINITY_DN42195_c0_g2_i1 1415 1435 AGTTGGTGACCTGGGAACACT BLAST psRNATarget
Ll_transcript_390945; TRINITY_DN46461_c0_g2_i4 628 648 GAGAGGTGACTTGGGAAGACA BLAST psRNATarget
Ll_transcript_390943; TRINITY_DN46461_c0_g2_i2 628 648 GAGAGGTGACTTGGGAAGACA BLAST psRNATarget
Ll_transcript_441909; TRINITY_DN47859_c0_g1_i10 1436 1456 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_441913; TRINITY_DN47859_c0_g1_i14 1436 1456 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_441912; TRINITY_DN47859_c0_g1_i13 1564 1584 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_441899; TRINITY_DN47859_c0_g1_i3 1568 1588 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_441906; TRINITY_DN47859_c0_g1_i7 1564 1584 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_441908; TRINITY_DN47859_c0_g1_i9 1568 1588 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_441911; TRINITY_DN47859_c0_g1_i12 1696 1716 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_441900; TRINITY_DN47859_c0_g1_i4 1564 1584 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_441910; TRINITY_DN47859_c0_g1_i11 1696 1716 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_441907; TRINITY_DN47859_c0_g1_i8 1696 1716 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_441905; TRINITY_DN47859_c0_g1_i6 1696 1716 AAGAGGCGACTTGGGAAGATA BLAST psRNATarget
Ll_transcript_367588; TRINITY_DN48681_c0_g1_i10 2129 2149 AAGGGACGGCTTAGGAACACA BLAST psRNATarget
Ll_transcript_413349; TRINITY_DN45689_c0_g1_i7 387 407 CTGGGACGGCCTGGGAATGCT BLAST psRNATarget
Ll_transcript_413353; TRINITY_DN45689_c0_g1_i10 437 457 CTGGGACGGCCTGGGAATGCT BLAST psRNATarget
Ll_transcript_314175; TRINITY_DN46960_c0_g1_i1 1487 1507 TTCAGCTGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_314177; TRINITY_DN46960_c0_g1_i2 1509 1529 TTCAGCTGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_314183; TRINITY_DN46960_c0_g1_i3 2404 2424 TTCAGCTGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_314187; TRINITY_DN46960_c0_g1_i6 2217 2237 TTCAGCTGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_432819; TRINITY_DN44587_c0_g1_i2 82 102 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_432827; TRINITY_DN44587_c0_g1_i7 234 254 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_432820; TRINITY_DN44587_c0_g1_i3 82 102 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_432824; TRINITY_DN44587_c0_g1_i5 82 102 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_432822; TRINITY_DN44587_c0_g1_i4 234 254 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_432828; TRINITY_DN44587_c0_g1_i8 82 102 CTGCGGTGGCCTGGGAACCCA BLAST psRNATarget
Ll_transcript_506112; TRINITY_DN52515_c1_g1_i19 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506113; TRINITY_DN52515_c1_g1_i20 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506105; TRINITY_DN52515_c1_g1_i12 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506095; TRINITY_DN52515_c1_g1_i3 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506100; TRINITY_DN52515_c1_g1_i7 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506110; TRINITY_DN52515_c1_g1_i17 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506097; TRINITY_DN52515_c1_g1_i5 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506101; TRINITY_DN52515_c1_g1_i8 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506107; TRINITY_DN52515_c1_g1_i14 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506108; TRINITY_DN52515_c1_g1_i15 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506111; TRINITY_DN52515_c1_g1_i18 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506098; TRINITY_DN52515_c1_g1_i6 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506096; TRINITY_DN52515_c1_g1_i4 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_506102; TRINITY_DN52515_c1_g1_i9 622 642 GTGGGGCAGTTTGGGGACATA BLAST psRNATarget
Ll_transcript_528126; TRINITY_DN51056_c0_g2_i1 241 261 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_528153; TRINITY_DN51056_c0_g2_i8 517 537 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_528145; TRINITY_DN51056_c0_g1_i11 680 700 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_528142; TRINITY_DN51056_c0_g2_i4 517 537 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_528138; TRINITY_DN51056_c0_g1_i8 845 865 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_528141; TRINITY_DN51056_c0_g1_i10 680 700 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_528143; TRINITY_DN51056_c0_g2_i5 952 972 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_528128; TRINITY_DN51056_c0_g2_i2 1344 1364 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget
Ll_transcript_528130; TRINITY_DN51056_c0_g2_i3 1344 1364 ATGGTGCAACCTGGGAGCACT BLAST psRNATarget

Expression of miRNA 360


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)