miRNA 365 details

Id Micro365
SequenceTGTGTTCTCAGGTCGCCCCCG 
Annotated namesata-miR398f-3p; ata-miR398g-3p; sbi-miR398; tae-miR398; zma-miR398a-3p; zma-miR398b-3p; 
Annotated pre-miRNANone

Targets of miRNA 365

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_44480; FTRINITY_DN54194_c0_g2_i4 602 622 CAGGGGCGACCTGAGAACACA BLAST psRNATarget
Ll_transcript_44478; FTRINITY_DN54194_c0_g4_i5 3946 3966 CAGGGGCGACCTGAGAACACG BLAST psRNATarget
Ll_transcript_44490; FTRINITY_DN54194_c0_g4_i9 4283 4303 CAGGGGCGACCTGAGAACACG BLAST psRNATarget
Ll_transcript_44484; FTRINITY_DN54194_c0_g4_i7 4367 4387 CAGGGGCGACCTGAGAACACG BLAST psRNATarget
Ll_transcript_59477; FTRINITY_DN56226_c0_g4_i1 553 573 AGTGGGCGACTTGAGAACACC BLAST psRNATarget
Ll_transcript_59476; FTRINITY_DN56226_c0_g3_i2 769 789 CATGGGCGACTTGAGAACACT BLAST psRNATarget
Ll_transcript_59484; FTRINITY_DN56226_c0_g3_i3 1094 1114 CATGGGCGACTTGAGAACACT BLAST psRNATarget
Ll_transcript_202560; FTRINITY_DN56475_c2_g1_i5 583 603 AAAGGTCGACTTGAGAACACA BLAST psRNATarget
Ll_transcript_202574; FTRINITY_DN56475_c2_g1_i15 583 603 AAAGGTCGACTTGAGAACACA BLAST psRNATarget
Ll_transcript_202563; FTRINITY_DN56475_c2_g1_i8 583 603 AAAGGTCGACTTGAGAACACA BLAST psRNATarget
Ll_transcript_202588; FTRINITY_DN56475_c2_g1_i29 583 603 AAAGGTCGACTTGAGAACACA BLAST psRNATarget
Ll_transcript_202590; FTRINITY_DN56475_c2_g1_i31 583 603 AAAGGTCGACTTGAGAACACA BLAST psRNATarget
Ll_transcript_123822; FTRINITY_DN53756_c1_g3_i2 1505 1525 TCAATGCGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_123798; FTRINITY_DN53756_c1_g3_i1 1705 1725 TCAATGCGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_202570; FTRINITY_DN56475_c2_g5_i1 28 48 AAAGGGCGCCTTGAGAACACG BLAST psRNATarget
Ll_transcript_51114; FTRINITY_DN58856_c0_g4_i1 567 587 TGGGAGAGACCTGAGGACATG BLAST psRNATarget
Ll_transcript_236684; FTRINITY_DN54483_c3_g2_i1 886 906 TTTGGGTGAATTGAGAACACA BLAST psRNATarget
Ll_transcript_210789; FTRINITY_DN58335_c3_g3_i3 86 106 TGGGAGAGACCTGAGGACATG BLAST psRNATarget
Ll_transcript_210791; FTRINITY_DN58335_c3_g4_i1 49 69 TGGGAGAGACCTGAGGACATG BLAST psRNATarget
Ll_transcript_210800; FTRINITY_DN58335_c3_g3_i5 86 106 TGGGAGAGACCTGAGGACATG BLAST psRNATarget
Ll_transcript_202571; FTRINITY_DN56475_c2_g1_i12 576 596 AAAGGGCGCCTTGAGAACACG BLAST psRNATarget
Ll_transcript_202579; FTRINITY_DN56475_c2_g1_i20 576 596 AAAGGGCGCCTTGAGAACACG BLAST psRNATarget
Ll_transcript_202575; FTRINITY_DN56475_c2_g1_i16 576 596 AAAGGGCGCCTTGAGAACACG BLAST psRNATarget
Ll_transcript_202556; FTRINITY_DN56475_c2_g1_i1 576 596 AAAGGGCGCCTTGAGAACACG BLAST psRNATarget
Ll_transcript_202578; FTRINITY_DN56475_c2_g1_i19 576 596 AAAGGGCGCCTTGAGAACACG BLAST psRNATarget
Ll_transcript_63195; FTRINITY_DN55324_c3_g3_i10 70 90 AAGGGGCGATCTCAGATCACA BLAST psRNATarget
Ll_transcript_63198; FTRINITY_DN55324_c3_g3_i12 70 90 AAGGGGCGATCTCAGATCACA BLAST psRNATarget
Ll_transcript_63184; FTRINITY_DN55324_c3_g3_i7 70 90 AAGGGGCGATCTCAGATCACA BLAST psRNATarget
Ll_transcript_63179; FTRINITY_DN55324_c3_g3_i4 70 90 AAGGGGCGATCTCAGATCACA BLAST psRNATarget
Ll_transcript_63196; FTRINITY_DN55324_c3_g3_i11 70 90 AAGGGGCGATCTCAGATCACA BLAST psRNATarget
Ll_transcript_67501; FTRINITY_DN55049_c0_g6_i2 574 594 GGGGTGAGACTTGAGAGTACA BLAST psRNATarget
Ll_transcript_67502; FTRINITY_DN55049_c0_g6_i3 1512 1532 GGGGTGAGACTTGAGAGTACA BLAST psRNATarget
Ll_transcript_67496; FTRINITY_DN55049_c0_g6_i1 1725 1745 GGGGTGAGACTTGAGAGTACA BLAST psRNATarget
Ll_transcript_67510; FTRINITY_DN55049_c0_g6_i4 1512 1532 GGGGTGAGACTTGAGAGTACA BLAST psRNATarget
Ll_transcript_67522; FTRINITY_DN55049_c0_g6_i6 1725 1745 GGGGTGAGACTTGAGAGTACA BLAST psRNATarget
Ll_transcript_93340; FTRINITY_DN54881_c1_g11_i2 1248 1268 ATGGGGAGATCTGAGAAGATA BLAST psRNATarget
Ll_transcript_422606; TRINITY_DN47985_c1_g5_i1 184 204 CAGGGGCGACCTGAGAACACA BLAST psRNATarget
Ll_transcript_422598; TRINITY_DN47985_c1_g2_i1 2203 2223 CAGGGGCGACCTGAGAACACG BLAST psRNATarget
Ll_transcript_422607; TRINITY_DN47985_c1_g2_i3 2414 2434 CAGGGGCGACCTGAGAACACG BLAST psRNATarget
Ll_transcript_422602; TRINITY_DN47985_c1_g2_i2 3145 3165 CAGGGGCGACCTGAGAACACG BLAST psRNATarget
Ll_transcript_314490; TRINITY_DN46787_c4_g1_i2 905 925 AGTGGGCGACTTGAGAACACC BLAST psRNATarget
Ll_transcript_314489; TRINITY_DN46787_c4_g4_i1 779 799 CATGGGCGACTTGAGAACACT BLAST psRNATarget
Ll_transcript_344278; TRINITY_DN50424_c2_g1_i20 320 340 AAAGGTCGACTTGAGAACACA BLAST psRNATarget
Ll_transcript_344256; TRINITY_DN50424_c2_g1_i3 614 634 AAAGGTCGACTTGAGAACACA BLAST psRNATarget
Ll_transcript_344273; TRINITY_DN50424_c2_g1_i16 614 634 AAAGGTCGACTTGAGAACACA BLAST psRNATarget
Ll_transcript_344265; TRINITY_DN50424_c2_g1_i10 614 634 AAAGGTCGACTTGAGAACACA BLAST psRNATarget
Ll_transcript_533782; TRINITY_DN50026_c2_g1_i5 1145 1165 TTGGGGCCATCTGAGATCACA BLAST psRNATarget
Ll_transcript_533128; TRINITY_DN50040_c1_g7_i2 1350 1370 TCAATGCGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_533125; TRINITY_DN50040_c1_g7_i1 1350 1370 TCAATGCGACCTGGGAACACA BLAST psRNATarget
Ll_transcript_344268; TRINITY_DN50424_c2_g1_i12 606 626 AAAGGGCGCCTTGAGAACACG BLAST psRNATarget
Ll_transcript_344253; TRINITY_DN50424_c2_g1_i1 606 626 AAAGGGCGCCTTGAGAACACG BLAST psRNATarget
Ll_transcript_344260; TRINITY_DN50424_c2_g1_i7 606 626 AAAGGGCGCCTTGAGAACACG BLAST psRNATarget
Ll_transcript_352946; TRINITY_DN49462_c2_g1_i2 568 588 TGGGAGAGACCTGAGGACATG BLAST psRNATarget
Ll_transcript_352958; TRINITY_DN49462_c2_g1_i4 658 678 TGGGAGAGACCTGAGGACATG BLAST psRNATarget
Ll_transcript_415311; TRINITY_DN49665_c1_g1_i1 825 845 TTTGGGTGAATTGAGAACACA BLAST psRNATarget
Ll_transcript_460836; TRINITY_DN51126_c2_g1_i2 76 96 AAGGGGCGATCTCAGATCACA BLAST psRNATarget
Ll_transcript_325673; TRINITY_DN48062_c0_g1_i8 1115 1135 GGGGTGAGACTTGAGAGTACA BLAST psRNATarget
Ll_transcript_325658; TRINITY_DN48062_c0_g1_i1 574 594 GGGGTGAGACTTGAGAGTACA BLAST psRNATarget
Ll_transcript_325677; TRINITY_DN48062_c0_g1_i11 1073 1093 GGGGTGAGACTTGAGAGTACA BLAST psRNATarget
Ll_transcript_325676; TRINITY_DN48062_c0_g1_i10 1115 1135 GGGGTGAGACTTGAGAGTACA BLAST psRNATarget
Ll_transcript_367713; TRINITY_DN48646_c1_g6_i1 1223 1243 ATGGGGAGATCTGAGAAGATA BLAST psRNATarget
Ll_transcript_367714; TRINITY_DN48646_c1_g6_i2 1759 1779 ATGGGGAGATCTGAGAAGATA BLAST psRNATarget
Ll_transcript_464856; TRINITY_DN52601_c1_g2_i10 660 680 CTGGTGGGGTCTGAGAACGCA BLAST psRNATarget

Expression of miRNA 365


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)