Transcript | Ll_transcript_383799 |
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CDS coordinates | 142-2817 (+) |
Peptide sequence | MSSLLSLYTPHTFTSAPFSFKSNRFSSPRTTVVVSAAVSSPEKRTRKKKQLIKDDDSSLENNLRYTFMENLMDRARNRDSAAVTALIYDMIAAGLNPGPRSFHALVVSHVLNGDEQAAMDSLRRELSSGLRPVHETFVALARLFGSKGRAIRGLEILGAMEKLNYDIRHAWLVLIGELIRNKYLEDANQVFLKGAKGGLKATDEIYDTLIEENCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSCQATCGIPEIAFTTFENMLYGEDFMKPDTETYNWVIQAYTRADSYDRVQDVAELLGMMIEHHKRIQPNVKTHALLVECFTKYCVVREAIRHFRALKNFEGGTKVLHNEGNYGDPLSLYLRALCREGRIVEMLEALEAMAKDNQTIPPRAMLLSRKYRTLVSSWIEPLQEEAELGYEIDYIARYVAEGGLTGERKRWVPRRGKTPLDPDADGFIYSNPMETSFKQRCLEELKLHHRKLLKNLQNEGLAALGDGASESDYIRVRERLKKFIKGPEQNALKPKAASKMLVSELKEELEAQGLPTDGTRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEEVDEEVDALISRIKLQEGNTEFWKRRFLGEDITSNNGKSLDVGKSESDEVSDDVDAVEDAAKGVEDDEADDDEDDEEVEQVEEEVEPVDNQDVDRVKQKEVEAKKPLQMIGVQLLKDSNQPTSSKKYKKTSRRLLVEDDADDDWFPDDIFEAFKELRKRKVFDVSDMYTIADAWGWTWERELKNKPPRRWSQEWEVELAIKVMQKVIELGGTPTIGDCAIIIRAAIRAPLPSAFLTILQITHGLGYKFGRPLYDEIISLCLDLGELDAAVAVVADLETTGILVSDETLDRVISAKHRINNTSNDNIIDV* |
ORF Type | complete |
Blastp | Pentatricopeptide repeat-containing protein At4g20090 from Arabidopsis with 22.81% of identity |
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Blastx | Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial from Arabidopsis with 24.52% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT4G20090) |
CantataDB | Link to cantataDB annotations (CNT0000541) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452207.1) |
Pfam | SAP domain (PF02037.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer