Transcript | Ll_transcript_385051 |
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CDS coordinates | 80-2017 (+) |
Peptide sequence | MRISLDDSNYSDPTHSPLTPNTDQLQWLPLPQHPLFTSTTLPTASSATKNLFAWDGASRLYFWDSVNTCLHRLSLRLGDPDPTSVLAASPSKVLQIDTELNFDVQKISINRNGTAMLLFGSERLCVMYLYGRASKTDVNLICRTITVGSNAYSNGSNDIRVLQALWHPSSDTHLGILSSDSVFRLFNLAVDPLQPEQEYYLQPVESGRSRNASSVCPVDFSFGDNHLWDKFSVFILFSDGAIYVLCPVVPFGSLFKYESLLEIYNDAQTFGLKSTNSVAASNSKLAISWLEATFPELKNVETQGDSLSLFRAHAYALFDSSLVLQGPLRRVGQGGSEDSVGRSAECEGRAISFLYNLVSKDSILVTAWSGGQLQIDALADEIQPLWSVGSPPRLRVDYLDQILGLAMICESISSSSLEDLDHNAWLGNPPPLLRLAIVDLALPRRAESGYNISLFIDNLMPERIYSLHDGGIDSIVLHFLPFTSQTNGKDDTLRPPSVHPVLNTCQSGSTSEPSLCGFVSLSDSFGYSWILAVTLSQECVVLEMKTWNLLLPVSIDMEKKPIQSEGESKEREMSTIISKELLSGPKEVLIPQAPSLRSVAADSIEGRSTLHQYFKLFHETYVEYAHKVCPSLLMLSYPCFFHSLF* |
ORF Type | complete |
Blastp | Nuclear pore complex protein NUP88 from Arabidopsis with 58.79% of identity |
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Blastx | Nuclear pore complex protein NUP88 from Arabidopsis with 61.84% of identity |
Eggnog | Nucleoporin 88kDa(ENOG410YC30) |
Kegg | Link to kegg annotations (AT5G05680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439391.1) |
Pfam | Nuclear pore component (PF10168.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer