miRNA 388 details

Id Micro388
SequenceTTCCTGATGCCTCTCATTCCTA 
Annotated namesosa-miR2118h; osa-miR2118k; zma-miR2118a; 
Annotated pre-miRNANone

Targets of miRNA 388

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_148978; FTRINITY_DN57607_c1_g1_i5 836 857 GATGAATGGGAGGCATCTGGAA BLAST psRNATarget
Ll_transcript_148979; FTRINITY_DN57607_c1_g1_i6 836 857 GATGAATGGGAGGCATCTGGAA BLAST psRNATarget
Ll_transcript_122140; FTRINITY_DN53713_c2_g1_i1 792 813 ATTAAATGAGAGGCATCGGGGA BLAST psRNATarget
Ll_transcript_148976; FTRINITY_DN57607_c1_g1_i4 836 857 GATGAATGGGAGGCATCTGGAA BLAST psRNATarget
Ll_transcript_148973; FTRINITY_DN57607_c1_g1_i1 737 758 GATGAATGGGAGGCATCTGGAA BLAST psRNATarget
Ll_transcript_148974; FTRINITY_DN57607_c1_g1_i2 836 857 GATGAATGGGAGGCATCTGGAA BLAST psRNATarget
Ll_transcript_122156; FTRINITY_DN53713_c2_g1_i5 1413 1434 ATTAAATGAGAGGCATCGGGGA BLAST psRNATarget
Ll_transcript_81713; FTRINITY_DN70405_c0_g1_i1 387 408 CGAGATTGAGAGGTATCAGGAG BLAST psRNATarget
Ll_transcript_51967; FTRINITY_DN58874_c1_g4_i5 736 757 AATGCAGGAGGGGCATCAGGAA BLAST psRNATarget
Ll_transcript_23807; FTRINITY_DN53843_c1_g1_i6 1103 1124 CAGGAATGGGAGGCATGGGGGA BLAST psRNATarget
Ll_transcript_23812; FTRINITY_DN53843_c1_g1_i11 622 643 CAGGAATGGGAGGCATGGGGGA BLAST psRNATarget
Ll_transcript_23808; FTRINITY_DN53843_c1_g1_i7 1322 1343 CAGGAATGGGAGGCATGGGGGA BLAST psRNATarget
Ll_transcript_23818; FTRINITY_DN53843_c1_g1_i17 1905 1926 CAGGAATGGGAGGCATGGGGGA BLAST psRNATarget
Ll_transcript_23816; FTRINITY_DN53843_c1_g1_i15 1959 1980 CAGGAATGGGAGGCATGGGGGA BLAST psRNATarget
Ll_transcript_49448; FTRINITY_DN58863_c0_g1_i6 1038 1059 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_49443; FTRINITY_DN58863_c0_g1_i1 904 925 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_49447; FTRINITY_DN58863_c0_g1_i5 904 925 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_49445; FTRINITY_DN58863_c0_g1_i3 1038 1059 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_49449; FTRINITY_DN58863_c0_g1_i7 1038 1059 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_49446; FTRINITY_DN58863_c0_g1_i4 904 925 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_49452; FTRINITY_DN58863_c0_g1_i8 904 925 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_49444; FTRINITY_DN58863_c0_g1_i2 1038 1059 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_110712; FTRINITY_DN55497_c0_g4_i3 364 385 CTAGAATGGGAGGAATCAGGAT BLAST psRNATarget
Ll_transcript_110710; FTRINITY_DN55497_c0_g4_i2 534 555 CTAGAATGGGAGGAATCAGGAT BLAST psRNATarget
Ll_transcript_219957; FTRINITY_DN56317_c2_g2_i12 779 800 ATAGAGTGAGAGGCAGTGGGAA BLAST psRNATarget
Ll_transcript_219945; FTRINITY_DN56317_c2_g2_i6 844 865 ATAGAGTGAGAGGCAGTGGGAA BLAST psRNATarget
Ll_transcript_219933; FTRINITY_DN56317_c2_g2_i1 906 927 ATAGAGTGAGAGGCAGTGGGAA BLAST psRNATarget
Ll_transcript_108930; FTRINITY_DN50797_c0_g2_i1 414 434 AGAGAATGAGAGGCTCAGGAA BLAST psRNATarget
Ll_transcript_108931; FTRINITY_DN50797_c0_g1_i2 177 197 AGAGAATGAGAGGCTCAGGAA BLAST psRNATarget
Ll_transcript_108933; FTRINITY_DN50797_c0_g2_i3 1165 1185 AGAGAATGAGAGGCTCAGGAA BLAST psRNATarget
Ll_transcript_108932; FTRINITY_DN50797_c0_g2_i2 1206 1226 AGAGAATGAGAGGCTCAGGAA BLAST psRNATarget
Ll_transcript_108934; FTRINITY_DN50797_c0_g2_i4 1348 1368 AGAGAATGAGAGGCTCAGGAA BLAST psRNATarget
Ll_transcript_235722; FTRINITY_DN52832_c0_g1_i2 812 833 GAAGAATTAGAGGCTTTAGGAA BLAST psRNATarget
Ll_transcript_235736; FTRINITY_DN52832_c0_g1_i7 975 996 GAAGAATTAGAGGCTTTAGGAA BLAST psRNATarget
Ll_transcript_92839; FTRINITY_DN54825_c2_g1_i1 4919 4940 CAGAAATGAGAGCCATTGGGAA BLAST psRNATarget
Ll_transcript_98653; FTRINITY_DN57138_c2_g2_i2 270 291 CTGGAATGAGGGGCATCACAAA BLAST psRNATarget
Ll_transcript_98652; FTRINITY_DN57138_c2_g2_i1 326 347 CTGGAATGAGGGGCATCACAAA BLAST psRNATarget
Ll_transcript_249394; FTRINITY_DN55996_c4_g3_i1 151 172 TGTGAATGAGAGGGATAAGGGA BLAST psRNATarget
Ll_transcript_134975; FTRINITY_DN58000_c1_g2_i1 461 482 ATGGAAGGAGAGGCATAAGGAC BLAST psRNATarget
Ll_transcript_134979; FTRINITY_DN58000_c1_g2_i2 461 482 ATGGAAGGAGAGGCATAAGGAC BLAST psRNATarget
Ll_transcript_134981; FTRINITY_DN58000_c1_g1_i8 1633 1654 ATGGAAGGAGAGGCATAAGGAC BLAST psRNATarget
Ll_transcript_134971; FTRINITY_DN58000_c1_g1_i1 1662 1683 ATGGAAGGAGAGGCATAAGGAC BLAST psRNATarget
Ll_transcript_134976; FTRINITY_DN58000_c1_g1_i5 1633 1654 ATGGAAGGAGAGGCATAAGGAC BLAST psRNATarget
Ll_transcript_134982; FTRINITY_DN58000_c1_g1_i9 1633 1654 ATGGAAGGAGAGGCATAAGGAC BLAST psRNATarget
Ll_transcript_210394; FTRINITY_DN58308_c0_g1_i3 2095 2118 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_210412; FTRINITY_DN58308_c0_g1_i15 2095 2118 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_210410; FTRINITY_DN58308_c0_g1_i14 2164 2187 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_210407; FTRINITY_DN58308_c0_g1_i12 2220 2243 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_210392; FTRINITY_DN58308_c0_g1_i1 2294 2317 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_210397; FTRINITY_DN58308_c0_g1_i6 2095 2118 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_210393; FTRINITY_DN58308_c0_g1_i2 1778 1801 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_210406; FTRINITY_DN58308_c0_g1_i11 2095 2118 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_210396; FTRINITY_DN58308_c0_g1_i5 2095 2118 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_210398; FTRINITY_DN58308_c0_g1_i7 1778 1801 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_303082; TRINITY_DN48266_c0_g1_i12 130 151 GAATCATGAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_303071; TRINITY_DN48266_c0_g1_i1 130 151 GAATCATGAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_303077; TRINITY_DN48266_c0_g1_i7 130 151 GAATCATGAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_303080; TRINITY_DN48266_c0_g1_i10 130 151 GAATCATGAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_476031; TRINITY_DN47445_c5_g1_i1 754 775 ATTAAATGAGAGGCATCGGGGA BLAST psRNATarget
Ll_transcript_515377; TRINITY_DN50840_c1_g1_i6 115 136 GATGAATGGGAGGCATCTGGAA BLAST psRNATarget
Ll_transcript_515373; TRINITY_DN50840_c1_g1_i2 403 424 GATGAATGGGAGGCATCTGGAA BLAST psRNATarget
Ll_transcript_515375; TRINITY_DN50840_c1_g1_i4 786 807 GATGAATGGGAGGCATCTGGAA BLAST psRNATarget
Ll_transcript_515376; TRINITY_DN50840_c1_g1_i5 964 985 GATGAATGGGAGGCATCTGGAA BLAST psRNATarget
Ll_transcript_515374; TRINITY_DN50840_c1_g1_i3 1262 1283 GATGAATGGGAGGCATCTGGAA BLAST psRNATarget
Ll_transcript_303322; TRINITY_DN48283_c1_g1_i2 538 559 CGAGATTGAGAGGTATCAGGAG BLAST psRNATarget
Ll_transcript_303324; TRINITY_DN48283_c1_g1_i3 538 559 CGAGATTGAGAGGTATCAGGAG BLAST psRNATarget
Ll_transcript_303321; TRINITY_DN48283_c1_g1_i1 538 559 CGAGATTGAGAGGTATCAGGAG BLAST psRNATarget
Ll_transcript_350573; TRINITY_DN52487_c1_g1_i22 1441 1462 AATGCAGGAGGGGCATCAGGAA BLAST psRNATarget
Ll_transcript_315543; TRINITY_DN46730_c1_g3_i1 405 426 CAGGAATGGGAGGCATGGGGGA BLAST psRNATarget
Ll_transcript_315548; TRINITY_DN46730_c1_g3_i2 564 585 CAGGAATGGGAGGCATGGGGGA BLAST psRNATarget
Ll_transcript_349378; TRINITY_DN52410_c0_g2_i5 880 901 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_349388; TRINITY_DN52410_c0_g2_i12 904 925 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_349381; TRINITY_DN52410_c0_g2_i7 880 901 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_349373; TRINITY_DN52410_c0_g2_i1 904 925 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_349385; TRINITY_DN52410_c0_g2_i9 880 901 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_349389; TRINITY_DN52410_c0_g2_i13 904 925 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_349387; TRINITY_DN52410_c0_g2_i11 880 901 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_349386; TRINITY_DN52410_c0_g2_i10 880 901 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_349379; TRINITY_DN52410_c0_g2_i6 880 901 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_349384; TRINITY_DN52410_c0_g2_i8 904 925 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_349375; TRINITY_DN52410_c0_g2_i3 904 925 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_349374; TRINITY_DN52410_c0_g2_i2 880 901 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_349376; TRINITY_DN52410_c0_g2_i4 904 925 TAAGAATCAGGGACATCAGGAA BLAST psRNATarget
Ll_transcript_458381; TRINITY_DN49991_c2_g1_i3 518 539 CTAGAATGGGAGGAATCAGGAT BLAST psRNATarget
Ll_transcript_440942; TRINITY_DN48336_c3_g1_i2 873 894 GGAGAATGAGGGGTTTTAGGAA BLAST psRNATarget
Ll_transcript_363377; TRINITY_DN48499_c1_g2_i10 833 854 ATAGAGTGAGAGGCAGTGGGAA BLAST psRNATarget
Ll_transcript_440939; TRINITY_DN48336_c3_g1_i1 1251 1272 GGAGAATGAGGGGTTTTAGGAA BLAST psRNATarget
Ll_transcript_392406; TRINITY_DN45962_c3_g2_i2 147 167 AGAGAATGAGAGGCTCAGGAA BLAST psRNATarget
Ll_transcript_392405; TRINITY_DN45962_c3_g2_i1 304 324 AGAGAATGAGAGGCTCAGGAA BLAST psRNATarget
Ll_transcript_392404; TRINITY_DN45962_c3_g1_i3 314 334 AGAGAATGAGAGGCTCAGGAA BLAST psRNATarget
Ll_transcript_392402; TRINITY_DN45962_c3_g1_i1 531 551 AGAGAATGAGAGGCTCAGGAA BLAST psRNATarget
Ll_transcript_392403; TRINITY_DN45962_c3_g1_i2 714 734 AGAGAATGAGAGGCTCAGGAA BLAST psRNATarget
Ll_transcript_280221; TRINITY_DN50166_c0_g4_i2 750 771 GAAGAATTAGAGGCTTTAGGAA BLAST psRNATarget
Ll_transcript_449575; TRINITY_DN50685_c0_g7_i1 475 496 AAGGAATGAGAGGGTTTAGGAA BLAST psRNATarget
Ll_transcript_440964; TRINITY_DN48341_c4_g8_i1 1995 2016 CAGAAATGAGAGCCATTGGGAA BLAST psRNATarget
Ll_transcript_510804; TRINITY_DN59198_c0_g1_i1 192 213 CTGGAATGAGGGGCATCACAAA BLAST psRNATarget
Ll_transcript_523103; TRINITY_DN67272_c0_g1_i1 62 83 TGTGAATGAGAGGGATAAGGGA BLAST psRNATarget
Ll_transcript_461066; TRINITY_DN51164_c1_g1_i3 578 599 ATGGAAGGAGAGGCATAAGGAC BLAST psRNATarget
Ll_transcript_461074; TRINITY_DN51164_c1_g1_i11 672 693 ATGGAAGGAGAGGCATAAGGAC BLAST psRNATarget
Ll_transcript_461070; TRINITY_DN51164_c1_g1_i7 1665 1686 ATGGAAGGAGAGGCATAAGGAC BLAST psRNATarget
Ll_transcript_461073; TRINITY_DN51164_c1_g1_i10 1665 1686 ATGGAAGGAGAGGCATAAGGAC BLAST psRNATarget
Ll_transcript_303090; TRINITY_DN48266_c0_g1_i17 57 78 GAATCATGAGAGGCCTCAGGAA BLAST psRNATarget
Ll_transcript_303078; TRINITY_DN48266_c0_g1_i8 102 123 GAATCATGAGAGGCCTCAGGAA BLAST psRNATarget
Ll_transcript_303085; TRINITY_DN48266_c0_g1_i13 102 123 GAATCATGAGAGGCCTCAGGAA BLAST psRNATarget
Ll_transcript_303079; TRINITY_DN48266_c0_g1_i9 102 123 GAATCATGAGAGGCCTCAGGAA BLAST psRNATarget
Ll_transcript_446274; TRINITY_DN51856_c0_g1_i18 1779 1802 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_446263; TRINITY_DN51856_c0_g1_i12 1779 1802 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_446275; TRINITY_DN51856_c0_g1_i19 1978 2001 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_446248; TRINITY_DN51856_c0_g1_i1 2096 2119 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_446265; TRINITY_DN51856_c0_g1_i13 2154 2177 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_446270; TRINITY_DN51856_c0_g1_i16 2096 2119 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_446266; TRINITY_DN51856_c0_g1_i14 2235 2258 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_446249; TRINITY_DN51856_c0_g1_i2 1779 1802 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_446257; TRINITY_DN51856_c0_g1_i6 1779 1802 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_446261; TRINITY_DN51856_c0_g1_i10 2096 2119 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_446254; TRINITY_DN51856_c0_g1_i3 2096 2119 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_446271; TRINITY_DN51856_c0_g1_i17 2235 2258 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget
Ll_transcript_446258; TRINITY_DN51856_c0_g1_i7 2295 2318 TAAAAATGTCAGAGGCATCAGGAA BLAST psRNATarget

Expression of miRNA 388


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)