miRNA 389 details

Id Micro389
SequenceTTCGATGTCTAGCAGTGCCA 
Annotated namesath-miR775; 
Annotated pre-miRNANone

Targets of miRNA 389

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_76186; FTRINITY_DN55573_c0_g1_i11 842 861 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_76182; FTRINITY_DN55573_c0_g1_i7 895 914 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_76183; FTRINITY_DN55573_c0_g1_i8 842 861 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_76181; FTRINITY_DN55573_c0_g1_i6 895 914 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_76173; FTRINITY_DN55573_c0_g1_i1 1652 1671 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_76180; FTRINITY_DN55573_c0_g1_i5 1652 1671 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_76195; FTRINITY_DN55573_c0_g1_i16 1652 1671 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_76184; FTRINITY_DN55573_c0_g1_i9 1652 1671 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_81990; FTRINITY_DN49829_c0_g1_i1 744 763 AGGCACAGTTGGACATCGAG BLAST psRNATarget
Ll_transcript_270262; FTRINITY_DN83984_c0_g1_i1 159 178 TGGTGTGGCTAGACATTGAA BLAST psRNATarget
Ll_transcript_163991; FTRINITY_DN53250_c6_g2_i2 802 820 TGGCACGCTGGATATCGAA BLAST psRNATarget
Ll_transcript_29023; FTRINITY_DN52219_c0_g1_i3 891 910 TGGCACTGCTAGTTATGGAA BLAST psRNATarget
Ll_transcript_154593; FTRINITY_DN56526_c2_g7_i1 38 57 ATGCACTGCTAGATGTGGAA BLAST psRNATarget
Ll_transcript_126383; FTRINITY_DN55613_c3_g1_i1 162 181 AGGTATTGTTAGATTTCGAA BLAST psRNATarget
Ll_transcript_126384; FTRINITY_DN55613_c3_g1_i2 162 181 AGGTATTGTTAGATTTCGAA BLAST psRNATarget
Ll_transcript_240086; FTRINITY_DN50243_c0_g1_i7 415 434 GGGTGTTGCTAGACATTGTA BLAST psRNATarget
Ll_transcript_240082; FTRINITY_DN50243_c0_g1_i3 411 430 GGGTGTTGCTAGACATTGTA BLAST psRNATarget
Ll_transcript_240083; FTRINITY_DN50243_c0_g1_i4 1237 1256 GGGTGTTGCTAGACATTGTA BLAST psRNATarget
Ll_transcript_240081; FTRINITY_DN50243_c0_g1_i2 1237 1256 GGGTGTTGCTAGACATTGTA BLAST psRNATarget
Ll_transcript_158025; FTRINITY_DN54717_c3_g2_i1 206 225 TGGAAATGCTAGACGTTGGA BLAST psRNATarget
Ll_transcript_3172; FTRINITY_DN33172_c0_g1_i1 303 322 AAGAGCTGCTGGACATTGAA BLAST psRNATarget
Ll_transcript_201793; FTRINITY_DN56469_c0_g4_i1 319 338 AGGGATTGTTAGACAACGAA BLAST psRNATarget
Ll_transcript_64994; FTRINITY_DN55361_c3_g1_i9 42 61 AGGAATTGTTAAACATCGAA BLAST psRNATarget
Ll_transcript_64993; FTRINITY_DN55361_c3_g1_i8 42 61 AGGAATTGTTAAACATCGAA BLAST psRNATarget
Ll_transcript_64985; FTRINITY_DN55361_c3_g1_i1 243 262 AGGAATTGTTAAACATCGAA BLAST psRNATarget
Ll_transcript_441024; TRINITY_DN48381_c4_g1_i1 989 1008 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_441034; TRINITY_DN48381_c4_g1_i10 2219 2238 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_441030; TRINITY_DN48381_c4_g1_i6 1627 1646 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_441035; TRINITY_DN48381_c4_g1_i11 1627 1646 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_441033; TRINITY_DN48381_c4_g1_i9 2159 2178 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_441027; TRINITY_DN48381_c4_g1_i4 1627 1646 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_441031; TRINITY_DN48381_c4_g1_i7 2159 2178 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_441025; TRINITY_DN48381_c4_g1_i2 2857 2876 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_441029; TRINITY_DN48381_c4_g1_i5 3389 3408 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_441032; TRINITY_DN48381_c4_g1_i8 2857 2876 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_441026; TRINITY_DN48381_c4_g1_i3 3389 3408 CGGCACTACTAGATATCGGA BLAST psRNATarget
Ll_transcript_523895; TRINITY_DN43035_c0_g1_i1 863 882 AGGCACAGTTGGACATCGAG BLAST psRNATarget
Ll_transcript_440637; TRINITY_DN48321_c5_g2_i3 1450 1468 TGGCACGCTGGATATCGAA BLAST psRNATarget
Ll_transcript_304985; TRINITY_DN52223_c2_g1_i13 3 22 TGGTACTGCTAGACATGTAA BLAST psRNATarget
Ll_transcript_304978; TRINITY_DN52223_c2_g1_i7 3 22 TGGTACTGCTAGACATGTAA BLAST psRNATarget
Ll_transcript_276931; TRINITY_DN45731_c0_g2_i1 879 898 TGGCACTGCTAGTTATGGAA BLAST psRNATarget
Ll_transcript_407270; TRINITY_DN49525_c1_g1_i1 2 21 GGGTGTTGCTAGACATTGTA BLAST psRNATarget
Ll_transcript_323952; TRINITY_DN45308_c1_g2_i4 120 139 AGGTATTGTTAGATTTCGAA BLAST psRNATarget
Ll_transcript_407271; TRINITY_DN49525_c1_g1_i2 1195 1214 GGGTGTTGCTAGACATTGTA BLAST psRNATarget
Ll_transcript_407274; TRINITY_DN49525_c1_g1_i4 1312 1331 GGGTGTTGCTAGACATTGTA BLAST psRNATarget
Ll_transcript_407273; TRINITY_DN49525_c1_g1_i3 1499 1518 GGGTGTTGCTAGACATTGTA BLAST psRNATarget
Ll_transcript_403780; TRINITY_DN50579_c1_g3_i1 870 889 TGGAAATGCTAGACGTTGGA BLAST psRNATarget
Ll_transcript_288147; TRINITY_DN51309_c4_g5_i1 74 93 AGGGATTGTTAGACAACGAA BLAST psRNATarget

Expression of miRNA 389


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)