Transcript | Ll_transcript_474934 |
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CDS coordinates | 218-1579 (+) |
Peptide sequence | MVKVHSPRCFITLILLLMPLLLTTINAFNQNQNQKQLRDGDIVEEADLKNSSMAETEGSGDDAFNEHAVDNPEEIVSMVDMTIRNYTERRNLNFFSCGTGNPIDDCWRCDKLWYRNRKRLADCAIGFGRNAIGGRDGRYYVVTDPSDNDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDARGFNVHIAHGACITIQYITNVIIHGLNIHDCIQTGNAMVRSSPSHFGWRTMADGDGISIFGASHIWVDHNSLSNCSDGLIDAIIGSTAITISNNFFTRHNEVMLLGHSDSYARDKHMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPLNSHAKEVTKRVETGEDTGEDTWKNWNWRSDGDLLLNGAYFTASGAGSAASYARASSLSAQSSSVVGTLTSAAGVLNCRRGTMC* |
ORF Type | complete |
Blastp | Probable pectate lyase 15 from Arabidopsis with 71.92% of identity |
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Blastx | Probable pectate lyase 10 from Arabidopsis with 80.92% of identity |
Eggnog | pectate lyase activity(COG3866) |
Kegg | Link to kegg annotations (AT4G13710) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450202.1) |
Pfam | Pectate lyase (PF00544.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer