Transcript | Ll_transcript_475885 |
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CDS coordinates | 278-2227 (+) |
Peptide sequence | MCTGTKSKPSQSGLVMEDEYGRQEELHHKISALLEFSAADDLIGFEDVVEKEGHDIDGVGLWYGRRVGSNKVGYEERTPLMIASTFGSQGVLTYILRTGRVDVNRVTGSDGATALHCAVAGGSAASLEIVKLLLDASADVNAVDAHGNRPRDLIVSVANSIFNSRKRVLQALLEGAYGTDQACLTFEEMIGQIEEQQRQDVNTHHVSKDGTEKKGYLVDLSLPDIKNGIYSTDEFRMYTFKVKPCSRAYPHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGINCSRRVCFFAHTAEELRPLYVSTGSAVLSPHASTSSAMDFAAALSMLPGSPSSMSIMSPSPFTPPMSPSANGMHSNVPWPQPNVPALHLPGSNLQSSRLRSSLHARDIPMDDFDLFSDYDQQHLLNELSCLSPQHPMNTNNLNRSGRMKPLTPSNLDDLFSAESSSPRFADGSLASTVFSPTHKSAVFNQFQQQQSMLSPVNTNFSPKNVEHPLLQAASFGAQSSGRMSPRNMEPISPMNSRMSMLAQREKQQQFRSLSSRELGSNSAAAIAAASANSWSRWGSPNGRADWAAGIEEFNKHRRSSSFELGNNGEEPDLSWVQSLVKESPTE |
ORF Type | 3prime_partial |
Blastp | Zinc finger CCCH domain-containing protein 30 from Arabidopsis with 57.32% of identity |
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Blastx | Zinc finger CCCH domain-containing protein 30 from Arabidopsis with 54.92% of identity |
Eggnog | nucleic acid binding transcription factor activity(ENOG410Y7IC) |
Kegg | Link to kegg annotations (AT2G41900) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444092.1) |
Pfam | Ankyrin repeats (3 copies) (PF12796.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer