Transcript | Ll_transcript_477215 |
---|---|
CDS coordinates | 425-3388 (+) |
Peptide sequence | MRQVVDSLPVLRSHGYYTKPSLKELASLELVDPGYCTRVPHFTVGRLGYGSVTYLAKTDVRGLNLDEIVKFHKHEVVVYDDENDKPEVGMGLNKPAEVVLVLDSGIFNSKDVPVQRLKQCTERQGAEFVSFDISTGEWKFLVQHFSRFGFGDDDDEGDITMDDAEIHDVLKESPTNANGIELSHSLPAHLRLDPVKTREMRLLMFPDEEEAEDFGQKSSFGKESVRPSHNSSQAMNLRSTPPVARKTPFPLLEYKHGSFESNSPGAILMVQQRKGSPLKTVKTQGFKLDLKHETPVSRNYARNIVDAGLFMGKSFRVGWGPNGILVHSGAPVGSGSDHRLLSSVVNLEKVAFDNLVRDENKKVSEELIDHTLVSPLNFHKGLNHVMKGVEIGPCKLTLQKLEASRTALSEISHGYCDIIERQMTVPELSSSTRLGLTHQVMTWELIRVLFSEREPKGQVESLGADNEEDMMQDMKEASQDVEPEALPLMRRAEFSYWLRESVSYHVQNQISSLNDSHYLQHIFVLLTGRQLDEAVQQAVSKGDVRLACLLGQAGGSTVNRSDIGRQLDIWRNKGLDFSFIEKDRLRLYELLAGNIHDALLGYSKLDWRRFLGLLMWYKLPPDTSLPIAFRTYKHFLDEGRAPFPVPLFIDEGTSEEAISYSADKHFDISFYLMLLHASDETEFGFLKNMLSAFSSTPDPLDYHMIWHQRAVLEAVGVIHSNDLHVLDMGYVSQLLCLGKCHWAIYVVLHLPIREDYPYLHVNLIREILFQYCEIWSSDESQYQFIDDLGIPPEWMHEALAIYYSYNGDLSKALEHFLQCANWQKAHTIFITSVAHKLFLQAKHTEIWRIVTAMEDHKSEIENWELGAGIYISFYWMRNSLQGDTNAMSELDSLQSKNAACEELVSQLNESLAFWGSRLPVDARVVYSKMASEMCDLLLSAVGEGATRDEQFSCFNTAFSAPIPENLRSGHLQDALHLFTSFLSEIAT* |
ORF Type | complete |
Blastp | Nuclear pore complex protein NUP96 from Arabidopsis with 58.65% of identity |
---|---|
Blastx | Nuclear pore complex protein NUP96 from Arabidopsis with 57.69% of identity |
Eggnog | nucleoporin(ENOG410ZXB8) |
Kegg | Link to kegg annotations (AT1G80680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435752.1) |
Pfam | Nucleoporin autopeptidase (PF04096.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer