miRNA 411 details

Id Micro411
SequenceTTGAGCCGCGTCAATATCTCT 
Annotated namessly-miR171e; stu-miR171b-3p; 
Annotated pre-miRNANone

Targets of miRNA 411

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_29004; FTRINITY_DN52221_c5_g1_i3 1308 1328 AGGGATATTGGCGCGGCTCAA BLAST psRNATarget
Ll_transcript_29008; FTRINITY_DN52221_c5_g1_i5 1407 1427 AGGGATATTGGCGCGGCTCAA BLAST psRNATarget
Ll_transcript_29010; FTRINITY_DN52221_c5_g1_i6 1308 1328 AGGGATATTGGCGCGGCTCAA BLAST psRNATarget
Ll_transcript_29005; FTRINITY_DN52221_c5_g1_i4 1590 1610 AGGGATATTGGCGCGGCTCAA BLAST psRNATarget
Ll_transcript_28999; FTRINITY_DN52221_c5_g1_i1 1407 1427 AGGGATATTGGCGCGGCTCAA BLAST psRNATarget
Ll_transcript_29000; FTRINITY_DN52221_c5_g1_i2 1590 1610 AGGGATATTGGCGCGGCTCAA BLAST psRNATarget
Ll_transcript_29011; FTRINITY_DN52221_c5_g6_i1 1802 1822 AGGGATATTGGCGCGGCTCAA BLAST psRNATarget
Ll_transcript_161477; FTRINITY_DN47926_c1_g1_i1 371 391 CGGGATATTGATGCGGTTCAA BLAST psRNATarget
Ll_transcript_205368; FTRINITY_DN56970_c1_g1_i9 1221 1241 TGTGATATTGATGCGGCTCGA BLAST psRNATarget
Ll_transcript_205350; FTRINITY_DN56970_c1_g1_i1 1235 1255 TGTGATATTGATGCGGCTCGA BLAST psRNATarget
Ll_transcript_205376; FTRINITY_DN56970_c1_g1_i13 1873 1893 TGTGATATTGATGCGGCTCGA BLAST psRNATarget
Ll_transcript_205378; FTRINITY_DN56970_c1_g1_i14 1887 1907 TGTGATATTGATGCGGCTCGA BLAST psRNATarget
Ll_transcript_205375; FTRINITY_DN56970_c1_g1_i12 1973 1993 TGTGATATTGATGCGGCTCGA BLAST psRNATarget
Ll_transcript_205362; FTRINITY_DN56970_c1_g1_i6 2403 2423 TGTGATATTGATGCGGCTCGA BLAST psRNATarget
Ll_transcript_205352; FTRINITY_DN56970_c1_g1_i2 2489 2509 TGTGATATTGATGCGGCTCGA BLAST psRNATarget
Ll_transcript_166913; FTRINITY_DN57362_c2_g1_i2 569 589 TTTGATATTGATGCGGCTTGA BLAST psRNATarget
Ll_transcript_86431; FTRINITY_DN83495_c0_g1_i1 315 335 TAAGGTATTGGCGCGCCTCAA BLAST psRNATarget
Ll_transcript_215646; FTRINITY_DN57799_c0_g1_i3 201 221 TGAGATATTGGTACGGTTCAA BLAST psRNATarget
Ll_transcript_215644; FTRINITY_DN57799_c0_g1_i1 201 221 TGAGATATTGGTACGGTTCAA BLAST psRNATarget
Ll_transcript_85409; FTRINITY_DN56640_c5_g1_i1 733 753 TGTGATATTGGAGCGGCTCAA BLAST psRNATarget
Ll_transcript_4736; FTRINITY_DN48827_c0_g2_i1 367 387 TTTGATATTGATGCGGCACAA BLAST psRNATarget
Ll_transcript_118297; FTRINITY_DN58213_c3_g1_i27 3230 3250 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_118281; FTRINITY_DN58213_c3_g1_i12 3304 3324 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_118292; FTRINITY_DN58213_c3_g1_i23 3304 3324 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_118298; FTRINITY_DN58213_c3_g1_i28 3559 3579 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_118289; FTRINITY_DN58213_c3_g1_i20 3559 3579 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_118284; FTRINITY_DN58213_c3_g1_i15 3485 3505 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_118291; FTRINITY_DN58213_c3_g1_i22 3230 3250 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_118270; FTRINITY_DN58213_c3_g1_i2 3304 3324 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_118286; FTRINITY_DN58213_c3_g1_i17 3559 3579 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_118272; FTRINITY_DN58213_c3_g1_i4 3304 3324 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_118277; FTRINITY_DN58213_c3_g1_i8 3422 3442 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_118282; FTRINITY_DN58213_c3_g1_i13 3559 3579 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_62652; FTRINITY_DN75420_c0_g1_i1 205 225 TAAGGTATTGGCGTGCCTCAA BLAST psRNATarget
Ll_transcript_120673; FTRINITY_DN58272_c0_g1_i3 2317 2337 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_120694; FTRINITY_DN58272_c0_g1_i15 2317 2337 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_120676; FTRINITY_DN58272_c0_g1_i5 2317 2337 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_120678; FTRINITY_DN58272_c0_g1_i7 2263 2283 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_120669; FTRINITY_DN58272_c0_g1_i1 2317 2337 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_120687; FTRINITY_DN58272_c0_g1_i11 2317 2337 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_120682; FTRINITY_DN58272_c0_g1_i8 2317 2337 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_120689; FTRINITY_DN58272_c0_g1_i13 2317 2337 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_120677; FTRINITY_DN58272_c0_g1_i6 2618 2638 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_120685; FTRINITY_DN58272_c0_g1_i9 2618 2638 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_157170; FTRINITY_DN45637_c0_g1_i1 223 243 AATGATATTGGTGGGGCTCAA BLAST psRNATarget
Ll_transcript_157171; FTRINITY_DN45637_c0_g1_i2 223 243 AATGATATTGGTGGGGCTCAA BLAST psRNATarget
Ll_transcript_240072; FTRINITY_DN50232_c0_g1_i4 1683 1703 ATAGATATTCATGTGGTTTAA BLAST psRNATarget
Ll_transcript_240071; FTRINITY_DN50232_c0_g1_i3 2313 2333 ATAGATATTCATGTGGTTTAA BLAST psRNATarget
Ll_transcript_94443; FTRINITY_DN54812_c4_g1_i4 2493 2513 ACAGATGTTGATGTGGATTAA BLAST psRNATarget
Ll_transcript_94447; FTRINITY_DN54812_c4_g1_i6 2599 2619 ACAGATGTTGATGTGGATTAA BLAST psRNATarget
Ll_transcript_94432; FTRINITY_DN54812_c4_g1_i2 2604 2624 ACAGATGTTGATGTGGATTAA BLAST psRNATarget
Ll_transcript_94436; FTRINITY_DN54812_c4_g1_i3 2708 2728 ACAGATGTTGATGTGGATTAA BLAST psRNATarget
Ll_transcript_94444; FTRINITY_DN54812_c4_g1_i5 2713 2733 ACAGATGTTGATGTGGATTAA BLAST psRNATarget
Ll_transcript_107196; FTRINITY_DN52933_c9_g2_i2 1255 1275 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_260237; FTRINITY_DN57996_c1_g2_i6 2042 2062 CAAGGTGTTGATGTGGTTTAG BLAST psRNATarget
Ll_transcript_81404; FTRINITY_DN58147_c2_g2_i8 1863 1883 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_81396; FTRINITY_DN58147_c2_g2_i6 1922 1942 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_81405; FTRINITY_DN58147_c2_g2_i9 1863 1883 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_81394; FTRINITY_DN58147_c2_g2_i5 1922 1942 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_81384; FTRINITY_DN58147_c2_g2_i4 2367 2387 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_81375; FTRINITY_DN58147_c2_g2_i1 2367 2387 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_27427; FTRINITY_DN51544_c0_g1_i4 210 230 CTGGATCTTGACCCGGTTCAA BLAST psRNATarget
Ll_transcript_27428; FTRINITY_DN51544_c0_g1_i5 236 256 CTGGATCTTGACCCGGTTCAA BLAST psRNATarget
Ll_transcript_21029; FTRINITY_DN55108_c2_g2_i3 511 531 GCTGTTGTTGATGCGGTTCAA BLAST psRNATarget
Ll_transcript_348613; TRINITY_DN52460_c2_g5_i3 1418 1438 AGGGATATTGGCGCGGCTCAA BLAST psRNATarget
Ll_transcript_348610; TRINITY_DN52460_c2_g5_i1 1601 1621 AGGGATATTGGCGCGGCTCAA BLAST psRNATarget
Ll_transcript_348611; TRINITY_DN52460_c2_g5_i2 1418 1438 AGGGATATTGGCGCGGCTCAA BLAST psRNATarget
Ll_transcript_348628; TRINITY_DN52460_c2_g5_i5 1601 1621 AGGGATATTGGCGCGGCTCAA BLAST psRNATarget
Ll_transcript_348624; TRINITY_DN52460_c2_g5_i4 1696 1716 AGGGATATTGGCGCGGCTCAA BLAST psRNATarget
Ll_transcript_361774; TRINITY_DN48462_c3_g1_i1 200 220 CGGGATATTGATGCGGTTCAA BLAST psRNATarget
Ll_transcript_301658; TRINITY_DN48235_c0_g5_i1 10 30 CGGGATATTGGTGCGGTTCAA BLAST psRNATarget
Ll_transcript_341958; TRINITY_DN49811_c0_g3_i10 1376 1396 TGTGATATTGATGCGGCTCGA BLAST psRNATarget
Ll_transcript_341950; TRINITY_DN49811_c0_g3_i7 1471 1491 TGTGATATTGATGCGGCTCGA BLAST psRNATarget
Ll_transcript_341933; TRINITY_DN49811_c0_g3_i1 1867 1887 TGTGATATTGATGCGGCTCGA BLAST psRNATarget
Ll_transcript_341951; TRINITY_DN49811_c0_g3_i8 1962 1982 TGTGATATTGATGCGGCTCGA BLAST psRNATarget
Ll_transcript_315953; TRINITY_DN46784_c2_g2_i5 52 72 TTTGATATTGATGCGGCTTGA BLAST psRNATarget
Ll_transcript_470998; TRINITY_DN42828_c0_g2_i1 290 310 TAAGGTATTGGCGCGCCTCAA BLAST psRNATarget
Ll_transcript_361779; TRINITY_DN48462_c6_g1_i2 317 337 TGAGATATTGGTACGGTTCAA BLAST psRNATarget
Ll_transcript_361778; TRINITY_DN48462_c6_g1_i1 317 337 TGAGATATTGGTACGGTTCAA BLAST psRNATarget
Ll_transcript_361595; TRINITY_DN7864_c0_g1_i1 901 921 TGTGATATTGGAGCGGCTCAA BLAST psRNATarget
Ll_transcript_381332; TRINITY_DN51414_c0_g1_i15 3326 3346 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_381341; TRINITY_DN51414_c0_g1_i24 3547 3567 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_318097; TRINITY_DN37170_c0_g1_i2 877 897 TTTGATATTGATGCGGCACAA BLAST psRNATarget
Ll_transcript_381330; TRINITY_DN51414_c0_g1_i13 3326 3346 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_381343; TRINITY_DN51414_c0_g1_i26 3326 3346 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_381328; TRINITY_DN51414_c0_g1_i11 3326 3346 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_381327; TRINITY_DN51414_c0_g1_i10 3679 3699 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_381329; TRINITY_DN51414_c0_g1_i12 3547 3567 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_381320; TRINITY_DN51414_c0_g1_i3 3863 3883 TGAGCTGTTGATGTGGCTTAA BLAST psRNATarget
Ll_transcript_294589; TRINITY_DN37495_c0_g1_i1 200 220 TAAGGTATTGGCGTGCCTCAA BLAST psRNATarget
Ll_transcript_416240; TRINITY_DN49633_c1_g1_i1 12 32 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_445689; TRINITY_DN51843_c0_g1_i3 2350 2370 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_445713; TRINITY_DN51843_c0_g1_i20 2379 2399 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_445700; TRINITY_DN51843_c0_g1_i12 2350 2370 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_445711; TRINITY_DN51843_c0_g1_i18 2350 2370 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_445709; TRINITY_DN51843_c0_g1_i16 2379 2399 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_445698; TRINITY_DN51843_c0_g1_i10 2379 2399 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_445690; TRINITY_DN51843_c0_g1_i4 2350 2370 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_445687; TRINITY_DN51843_c0_g1_i1 2379 2399 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_445692; TRINITY_DN51843_c0_g1_i6 2651 2671 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_445715; TRINITY_DN51843_c0_g1_i21 2651 2671 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_445703; TRINITY_DN51843_c0_g1_i14 2680 2700 AAAGACATTGATGCAGCTCAA BLAST psRNATarget
Ll_transcript_322051; TRINITY_DN60949_c0_g1_i1 28 48 GGAGACAGTGACGTGGTTCGA BLAST psRNATarget
Ll_transcript_444140; TRINITY_DN42606_c0_g1_i1 223 243 AATGATATTGGTGGGGCTCAA BLAST psRNATarget
Ll_transcript_279715; TRINITY_DN50194_c1_g2_i3 1151 1171 ACAGATGTTGATGTGGATTAA BLAST psRNATarget
Ll_transcript_444141; TRINITY_DN42606_c0_g1_i2 223 243 AATGATATTGGTGGGGCTCAA BLAST psRNATarget
Ll_transcript_478113; TRINITY_DN44446_c0_g1_i1 1614 1634 ATAGATATTCATGTGGTTTAA BLAST psRNATarget
Ll_transcript_478114; TRINITY_DN44446_c0_g1_i2 1670 1690 ATAGATATTCATGTGGTTTAA BLAST psRNATarget
Ll_transcript_478117; TRINITY_DN44446_c0_g1_i5 2035 2055 ATAGATATTCATGTGGTTTAA BLAST psRNATarget
Ll_transcript_478122; TRINITY_DN44446_c0_g1_i10 2138 2158 ATAGATATTCATGTGGTTTAA BLAST psRNATarget
Ll_transcript_279709; TRINITY_DN50194_c1_g2_i1 2589 2609 ACAGATGTTGATGTGGATTAA BLAST psRNATarget
Ll_transcript_279712; TRINITY_DN50194_c1_g2_i2 2625 2645 ACAGATGTTGATGTGGATTAA BLAST psRNATarget
Ll_transcript_279719; TRINITY_DN50194_c1_g2_i4 2698 2718 ACAGATGTTGATGTGGATTAA BLAST psRNATarget
Ll_transcript_279724; TRINITY_DN50194_c1_g2_i5 2734 2754 ACAGATGTTGATGTGGATTAA BLAST psRNATarget
Ll_transcript_348614; TRINITY_DN52460_c2_g2_i4 1972 1992 CAAGGTGTTGATGTGGTTTAG BLAST psRNATarget
Ll_transcript_348618; TRINITY_DN52460_c2_g2_i8 2029 2049 CAAGGTGTTGATGTGGTTTAG BLAST psRNATarget
Ll_transcript_356565; TRINITY_DN45857_c1_g2_i2 1194 1214 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_356569; TRINITY_DN45857_c1_g2_i3 1194 1214 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_356562; TRINITY_DN45857_c1_g2_i1 1253 1273 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_356574; TRINITY_DN45857_c1_g2_i7 1698 1718 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_356576; TRINITY_DN45857_c1_g2_i9 1698 1718 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_356571; TRINITY_DN45857_c1_g2_i4 1698 1718 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_356575; TRINITY_DN45857_c1_g2_i8 1941 1961 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_356577; TRINITY_DN45857_c1_g2_i10 1941 1961 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_356572; TRINITY_DN45857_c1_g2_i5 1941 1961 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_356573; TRINITY_DN45857_c1_g2_i6 1941 1961 CCAGATGTTGTTGTGGCTCGA BLAST psRNATarget
Ll_transcript_523703; TRINITY_DN43073_c0_g1_i4 504 524 GCTGTTGTTGATGCGGTTCAA BLAST psRNATarget
Ll_transcript_523700; TRINITY_DN43073_c0_g1_i2 504 524 GCTGTTGTTGATGCGGTTCAA BLAST psRNATarget

Expression of miRNA 411


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)