miRNA 443 details

Id Micro443
SequenceTTTGACGTGCTCGATCTGCTC 
Annotated namesath-miR3932b-5p; 
Annotated pre-miRNANone

Targets of miRNA 443

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_16979; FTRINITY_DN54501_c2_g1_i1 628 648 TGGCAGATCGAGCACGTCTAG BLAST psRNATarget
Ll_transcript_271276; FTRINITY_DN43311_c0_g1_i1 55 75 TAGGAGATCGAGCATATCAAA BLAST psRNATarget
Ll_transcript_90930; FTRINITY_DN53904_c0_g3_i1 140 160 TGGCACATTGAGTATGTTAAA BLAST psRNATarget
Ll_transcript_159829; FTRINITY_DN54716_c0_g1_i20 394 414 TTCCACATTGAGCATGTCAAA BLAST psRNATarget
Ll_transcript_159825; FTRINITY_DN54716_c0_g1_i17 416 436 TTCCACATTGAGCATGTCAAA BLAST psRNATarget
Ll_transcript_235089; FTRINITY_DN52899_c0_g1_i1 207 227 GCCCCGATCGAGCGCGTCAAG BLAST psRNATarget
Ll_transcript_159822; FTRINITY_DN54716_c0_g1_i15 616 636 TTCCACATTGAGCATGTCAAA BLAST psRNATarget
Ll_transcript_159804; FTRINITY_DN54716_c0_g1_i2 616 636 TTCCACATTGAGCATGTCAAA BLAST psRNATarget
Ll_transcript_206473; FTRINITY_DN51174_c0_g1_i4 1279 1298 TGGCAGTTGAGCACGTTAAA BLAST psRNATarget
Ll_transcript_228722; FTRINITY_DN52791_c6_g1_i1 966 986 TAGTAGGTCGGGTACGTCAGT BLAST psRNATarget
Ll_transcript_228723; FTRINITY_DN52791_c6_g1_i2 1479 1499 TAGTAGGTCGGGTACGTCAGT BLAST psRNATarget
Ll_transcript_201946; FTRINITY_DN56448_c0_g1_i13 676 696 GGACAGGTTGAGCATGTTAGA BLAST psRNATarget
Ll_transcript_112025; FTRINITY_DN55404_c5_g1_i6 624 644 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_201939; FTRINITY_DN56448_c0_g1_i8 676 696 GGACAGGTTGAGCATGTTAGA BLAST psRNATarget
Ll_transcript_201933; FTRINITY_DN56448_c0_g1_i4 899 919 GGACAGGTTGAGCATGTTAGA BLAST psRNATarget
Ll_transcript_201934; FTRINITY_DN56448_c0_g1_i5 676 696 GGACAGGTTGAGCATGTTAGA BLAST psRNATarget
Ll_transcript_201947; FTRINITY_DN56448_c0_g1_i14 899 919 GGACAGGTTGAGCATGTTAGA BLAST psRNATarget
Ll_transcript_201935; FTRINITY_DN56448_c0_g1_i6 899 919 GGACAGGTTGAGCATGTTAGA BLAST psRNATarget
Ll_transcript_201945; FTRINITY_DN56448_c0_g1_i12 899 919 GGACAGGTTGAGCATGTTAGA BLAST psRNATarget
Ll_transcript_112026; FTRINITY_DN55404_c5_g1_i7 624 644 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_112023; FTRINITY_DN55404_c5_g1_i5 858 878 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_201948; FTRINITY_DN56448_c0_g1_i15 676 696 GGACAGGTTGAGCATGTTAGA BLAST psRNATarget
Ll_transcript_201932; FTRINITY_DN56448_c0_g1_i3 676 696 GGACAGGTTGAGCATGTTAGA BLAST psRNATarget
Ll_transcript_272216; FTRINITY_DN66295_c0_g1_i1 415 435 CAGAAGGTTGGGTACGTCAGA BLAST psRNATarget
Ll_transcript_101552; FTRINITY_DN54902_c3_g1_i4 265 285 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_101555; FTRINITY_DN54902_c3_g1_i7 1619 1639 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_101553; FTRINITY_DN54902_c3_g1_i5 1619 1639 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_101550; FTRINITY_DN54902_c3_g1_i2 1723 1743 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_101556; FTRINITY_DN54902_c3_g1_i8 1619 1639 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_101554; FTRINITY_DN54902_c3_g1_i6 2232 2252 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_101549; FTRINITY_DN54902_c3_g1_i1 1619 1639 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_212376; FTRINITY_DN58322_c0_g3_i1 308 328 TGACAAATTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_141782; FTRINITY_DN54074_c5_g1_i10 214 234 GTGAAGATTGAACACGTCGAA BLAST psRNATarget
Ll_transcript_141770; FTRINITY_DN54074_c5_g1_i7 380 400 GTGAAGATTGAACACGTCGAA BLAST psRNATarget
Ll_transcript_141764; FTRINITY_DN54074_c5_g1_i5 419 439 GTGAAGATTGAACACGTCGAA BLAST psRNATarget
Ll_transcript_141754; FTRINITY_DN54074_c5_g1_i1 667 687 GTGAAGATTGAACACGTCGAA BLAST psRNATarget
Ll_transcript_141756; FTRINITY_DN54074_c5_g1_i2 737 757 GTGAAGATTGAACACGTCGAA BLAST psRNATarget
Ll_transcript_298246; TRINITY_DN51592_c1_g1_i1 498 518 TGGCAGATCGAGCACGTCTAG BLAST psRNATarget
Ll_transcript_298252; TRINITY_DN51592_c1_g1_i3 687 707 TGGCAGATCGAGCACGTCTAG BLAST psRNATarget
Ll_transcript_501273; TRINITY_DN47378_c6_g2_i1 55 75 TAGGAGATCGAGCATATCAAA BLAST psRNATarget
Ll_transcript_418996; TRINITY_DN26785_c0_g1_i1 330 350 CCGCAGATTGGTTACGTCAAA BLAST psRNATarget
Ll_transcript_315039; TRINITY_DN46759_c1_g3_i1 601 621 TTCCACATTGAGCATGTCAAA BLAST psRNATarget
Ll_transcript_279387; TRINITY_DN50137_c2_g1_i2 1311 1330 TGGCAGTTGAGCACGTTAAA BLAST psRNATarget
Ll_transcript_324901; TRINITY_DN31000_c0_g1_i1 95 115 GAGCAGGGCGAGCGCATCAAA BLAST psRNATarget
Ll_transcript_499686; TRINITY_DN47390_c1_g1_i4 1025 1045 TAGTAGGTCGGGTACGTCAGT BLAST psRNATarget
Ll_transcript_437062; TRINITY_DN48987_c2_g1_i2 640 660 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_437064; TRINITY_DN48987_c2_g1_i3 639 659 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_437068; TRINITY_DN48987_c2_g1_i7 640 660 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_437079; TRINITY_DN48987_c2_g1_i17 639 659 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_437065; TRINITY_DN48987_c2_g1_i4 640 660 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_437072; TRINITY_DN48987_c2_g1_i10 873 893 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_437078; TRINITY_DN48987_c2_g1_i16 640 660 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_437061; TRINITY_DN48987_c2_g1_i1 690 710 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_437075; TRINITY_DN48987_c2_g1_i13 640 660 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_437077; TRINITY_DN48987_c2_g1_i15 640 660 GAGCATACTGAGCATGTCAGA BLAST psRNATarget
Ll_transcript_420880; TRINITY_DN48782_c0_g2_i1 340 360 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_394103; TRINITY_DN21450_c0_g1_i1 384 404 CAGAAGGTTGAGCACGTTGAG BLAST psRNATarget
Ll_transcript_526015; TRINITY_DN47509_c5_g4_i3 411 431 CAGAAGGTTGGGTACGTCAGA BLAST psRNATarget
Ll_transcript_526012; TRINITY_DN47509_c5_g4_i1 523 543 CAGAAGGTTGGGTACGTCAGA BLAST psRNATarget
Ll_transcript_526014; TRINITY_DN47509_c5_g4_i2 634 654 CAGAAGGTTGGGTACGTCAGA BLAST psRNATarget
Ll_transcript_420885; TRINITY_DN48782_c0_g1_i8 1613 1633 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_420884; TRINITY_DN48782_c0_g1_i7 1692 1712 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_420878; TRINITY_DN48782_c0_g1_i2 1613 1633 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_420877; TRINITY_DN48782_c0_g1_i1 1692 1712 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_420881; TRINITY_DN48782_c0_g1_i4 2040 2060 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_420882; TRINITY_DN48782_c0_g1_i5 2040 2060 AAGTGGAGCGGGCACGTCAGG BLAST psRNATarget
Ll_transcript_292999; TRINITY_DN49178_c3_g1_i15 169 189 ATGCAGATTGTGCATGTTGAA BLAST psRNATarget
Ll_transcript_293016; TRINITY_DN49178_c3_g1_i31 169 189 ATGCAGATTGTGCATGTTGAA BLAST psRNATarget
Ll_transcript_292987; TRINITY_DN49178_c3_g1_i3 169 189 ATGCAGATTGTGCATGTTGAA BLAST psRNATarget
Ll_transcript_293009; TRINITY_DN49178_c3_g1_i24 169 189 ATGCAGATTGTGCATGTTGAA BLAST psRNATarget
Ll_transcript_292985; TRINITY_DN49178_c3_g1_i1 169 189 ATGCAGATTGTGCATGTTGAA BLAST psRNATarget
Ll_transcript_482169; TRINITY_DN70358_c0_g1_i1 96 116 GTACTGGTCGGGCACGTCAAG BLAST psRNATarget
Ll_transcript_317684; TRINITY_DN36742_c0_g1_i2 269 289 ATCCGTATTGAGCACGTTAAA BLAST psRNATarget
Ll_transcript_528467; TRINITY_DN51099_c0_g1_i4 394 414 GTGAAGATTGAACACGTCGAA BLAST psRNATarget
Ll_transcript_528459; TRINITY_DN51099_c0_g1_i3 435 455 GTGAAGATTGAACACGTCGAA BLAST psRNATarget
Ll_transcript_528482; TRINITY_DN51099_c0_g1_i6 474 494 GTGAAGATTGAACACGTCGAA BLAST psRNATarget

Expression of miRNA 443


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)