miRNA 444 details

Id Micro444
SequenceTTTGGACCGAAGGGAGCCCCT 
Annotated namesgma-miR319n; 
Annotated pre-miRNANone

Targets of miRNA 444

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_215129; FTRINITY_DN57761_c3_g7_i1 686 706 GCGAGCTTCCTTCGGTTCAGA BLAST psRNATarget
Ll_transcript_197956; FTRINITY_DN71654_c0_g1_i1 193 213 TACGGCTCCCTTCGGTCCGGC BLAST psRNATarget
Ll_transcript_84166; FTRINITY_DN56601_c3_g6_i3 746 766 TGGGATTTTCTTTGGTCCAAA BLAST psRNATarget
Ll_transcript_84169; FTRINITY_DN56601_c3_g6_i4 841 861 TGGGATTTTCTTTGGTCCAAA BLAST psRNATarget
Ll_transcript_84159; FTRINITY_DN56601_c3_g6_i1 1005 1025 TGGGATTTTCTTTGGTCCAAA BLAST psRNATarget
Ll_transcript_123407; FTRINITY_DN53776_c2_g1_i3 384 404 CTTGGCTATCTTCGGTCCAAG BLAST psRNATarget
Ll_transcript_123412; FTRINITY_DN53776_c2_g1_i6 313 333 CTTGGCTATCTTCGGTCCAAG BLAST psRNATarget
Ll_transcript_123406; FTRINITY_DN53776_c2_g1_i2 313 333 CTTGGCTATCTTCGGTCCAAG BLAST psRNATarget
Ll_transcript_123408; FTRINITY_DN53776_c2_g1_i4 384 404 CTTGGCTATCTTCGGTCCAAG BLAST psRNATarget
Ll_transcript_16234; FTRINITY_DN59281_c0_g12_i1 45 65 CTTGGCTATCTTCGGTCCAAG BLAST psRNATarget
Ll_transcript_201066; FTRINITY_DN56456_c2_g1_i1 764 784 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_201073; FTRINITY_DN56456_c2_g1_i2 1369 1389 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_201086; FTRINITY_DN56456_c2_g1_i5 1389 1409 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_201085; FTRINITY_DN56456_c2_g1_i4 1494 1514 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_201082; FTRINITY_DN56456_c2_g1_i3 1514 1534 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_178915; FTRINITY_DN58681_c4_g1_i25 1605 1625 TGGGGCTTCATTTGGTCCAAT BLAST psRNATarget
Ll_transcript_178906; FTRINITY_DN58681_c4_g1_i18 1784 1804 TGGGGCTTCATTTGGTCCAAT BLAST psRNATarget
Ll_transcript_178893; FTRINITY_DN58681_c4_g1_i5 1784 1804 TGGGGCTTCATTTGGTCCAAT BLAST psRNATarget
Ll_transcript_188617; FTRINITY_DN56761_c0_g11_i1 207 227 CGGGGCTCTCTTTGGTACGAG BLAST psRNATarget
Ll_transcript_49257; FTRINITY_DN10976_c0_g1_i1 103 123 GGGGGCCTCCATCGGTCCAAG BLAST psRNATarget
Ll_transcript_120850; FTRINITY_DN58233_c1_g1_i20 2767 2787 AGCGACTCCCTTCGGTCCCAA BLAST psRNATarget
Ll_transcript_120826; FTRINITY_DN58233_c1_g1_i2 2995 3015 AGCGACTCCCTTCGGTCCCAA BLAST psRNATarget
Ll_transcript_120828; FTRINITY_DN58233_c1_g1_i4 2767 2787 AGCGACTCCCTTCGGTCCCAA BLAST psRNATarget
Ll_transcript_120849; FTRINITY_DN58233_c1_g1_i19 2780 2800 AGCGACTCCCTTCGGTCCCAA BLAST psRNATarget
Ll_transcript_120843; FTRINITY_DN58233_c1_g1_i15 2995 3015 AGCGACTCCCTTCGGTCCCAA BLAST psRNATarget
Ll_transcript_120724; FTRINITY_DN58235_c0_g4_i3 34 54 TGGAGTTTTCTTCGGTTCAGA BLAST psRNATarget
Ll_transcript_120748; FTRINITY_DN58235_c0_g4_i7 34 54 TGGAGTTTTCTTCGGTTCAGA BLAST psRNATarget
Ll_transcript_120726; FTRINITY_DN58235_c0_g4_i5 34 54 TGGAGTTTTCTTCGGTTCAGA BLAST psRNATarget
Ll_transcript_120743; FTRINITY_DN58235_c0_g4_i6 34 54 TGGAGTTTTCTTCGGTTCAGA BLAST psRNATarget
Ll_transcript_120718; FTRINITY_DN58235_c0_g4_i1 34 54 TGGAGTTTTCTTCGGTTCAGA BLAST psRNATarget
Ll_transcript_67498; FTRINITY_DN55049_c0_g5_i2 143 163 AAGGGCTCCCTTCGGGGTAAA BLAST psRNATarget
Ll_transcript_123405; FTRINITY_DN53776_c2_g1_i1 295 315 CCTGGCTTCCTTCGCTCCAAG BLAST psRNATarget
Ll_transcript_67495; FTRINITY_DN55049_c0_g5_i1 143 163 AAGGGCTCCCTTCGGGGTAAA BLAST psRNATarget
Ll_transcript_110292; FTRINITY_DN55492_c4_g4_i1 311 331 TATGGTTCCCTGCGGTCCGAA BLAST psRNATarget
Ll_transcript_105277; FTRINITY_DN52951_c0_g1_i2 1046 1066 ATTGGTTCCCATTGGTCCAAA BLAST psRNATarget
Ll_transcript_105280; FTRINITY_DN52951_c0_g1_i3 1182 1202 ATTGGTTCCCATTGGTCCAAA BLAST psRNATarget
Ll_transcript_105274; FTRINITY_DN52951_c0_g1_i1 1618 1638 ATTGGTTCCCATTGGTCCAAA BLAST psRNATarget
Ll_transcript_110310; FTRINITY_DN55492_c4_g4_i6 1395 1415 TATGGTTCCCTGCGGTCCGAA BLAST psRNATarget
Ll_transcript_110303; FTRINITY_DN55492_c4_g4_i3 1831 1851 TATGGTTCCCTGCGGTCCGAA BLAST psRNATarget
Ll_transcript_110316; FTRINITY_DN55492_c4_g4_i7 2225 2245 TATGGTTCCCTGCGGTCCGAA BLAST psRNATarget
Ll_transcript_42025; FTRINITY_DN78255_c0_g1_i1 108 128 AAGAGCTTCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_16217; FTRINITY_DN59281_c0_g3_i1 211 231 TTTGGCTATCTTCGGTCTAAG BLAST psRNATarget
Ll_transcript_371166; TRINITY_DN47079_c3_g2_i5 817 837 AAGGGCTCCTTTTGGTTCAGG BLAST psRNATarget
Ll_transcript_371185; TRINITY_DN47079_c3_g2_i9 1002 1022 AAGGGCTCCTTTTGGTTCAGG BLAST psRNATarget
Ll_transcript_371161; TRINITY_DN47079_c3_g2_i4 1359 1379 AAGGGCTCCTTTTGGTTCAGG BLAST psRNATarget
Ll_transcript_348975; TRINITY_DN52415_c0_g5_i1 331 351 TCGGTCTCTCTTCGGTCTAAG BLAST psRNATarget
Ll_transcript_505522; TRINITY_DN52562_c2_g1_i2 821 841 TTGGGGTTCCTTCGGTCTAGA BLAST psRNATarget
Ll_transcript_476484; TRINITY_DN47428_c3_g6_i1 737 757 GCGAGCTTCCTTCGGTTCAGA BLAST psRNATarget
Ll_transcript_518378; TRINITY_DN51219_c0_g5_i5 799 819 TGGGATTTTCTTTGGTCCAAA BLAST psRNATarget
Ll_transcript_518376; TRINITY_DN51219_c0_g5_i3 968 988 TGGGATTTTCTTTGGTCCAAA BLAST psRNATarget
Ll_transcript_518377; TRINITY_DN51219_c0_g5_i4 1083 1103 TGGGATTTTCTTTGGTCCAAA BLAST psRNATarget
Ll_transcript_394678; TRINITY_DN62510_c0_g1_i1 190 210 ATGTGCTTCTTTTGGTCTAAA BLAST psRNATarget
Ll_transcript_305668; TRINITY_DN52237_c1_g4_i2 378 398 CTTGGCTATCTTCGGTCCAAG BLAST psRNATarget
Ll_transcript_305675; TRINITY_DN52237_c1_g4_i6 272 292 CTTGGCTATCTTCGGTCCAAG BLAST psRNATarget
Ll_transcript_305666; TRINITY_DN52237_c1_g4_i1 313 333 CTTGGCTATCTTCGGTCCAAG BLAST psRNATarget
Ll_transcript_305676; TRINITY_DN52237_c1_g4_i7 333 353 CTTGGCTATCTTCGGTCCAAG BLAST psRNATarget
Ll_transcript_305672; TRINITY_DN52237_c1_g4_i3 313 333 CTTGGCTATCTTCGGTCCAAG BLAST psRNATarget
Ll_transcript_305673; TRINITY_DN52237_c1_g4_i4 333 353 CTTGGCTATCTTCGGTCCAAG BLAST psRNATarget
Ll_transcript_305674; TRINITY_DN52237_c1_g4_i5 378 398 CTTGGCTATCTTCGGTCCAAG BLAST psRNATarget
Ll_transcript_518371; TRINITY_DN51219_c0_g5_i1 380 400 TAGGCTTTTCTTTGGTCCAAA BLAST psRNATarget
Ll_transcript_372975; TRINITY_DN47009_c3_g1_i9 759 779 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_372978; TRINITY_DN47009_c3_g1_i12 1349 1369 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_372977; TRINITY_DN47009_c3_g1_i11 1364 1384 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_372971; TRINITY_DN47009_c3_g1_i6 1349 1369 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_372983; TRINITY_DN47009_c3_g1_i17 1474 1494 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_372968; TRINITY_DN47009_c3_g1_i3 1489 1509 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_372980; TRINITY_DN47009_c3_g1_i14 1474 1494 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_372981; TRINITY_DN47009_c3_g1_i15 1489 1509 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_372974; TRINITY_DN47009_c3_g1_i8 1910 1930 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_372972; TRINITY_DN47009_c3_g1_i7 2035 2055 CTGGTCTCCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_501576; TRINITY_DN47355_c2_g1_i2 114 134 TGGGGCTTCATTTGGTCCAAT BLAST psRNATarget
Ll_transcript_501585; TRINITY_DN47355_c2_g1_i6 283 303 TGGGGCTTCATTTGGTCCAAT BLAST psRNATarget
Ll_transcript_501593; TRINITY_DN47355_c2_g1_i8 114 134 TGGGGCTTCATTTGGTCCAAT BLAST psRNATarget
Ll_transcript_501598; TRINITY_DN47355_c2_g1_i10 114 134 TGGGGCTTCATTTGGTCCAAT BLAST psRNATarget
Ll_transcript_311895; TRINITY_DN46932_c5_g2_i6 561 581 CGGGGCTCTCTTTGGTACGAG BLAST psRNATarget
Ll_transcript_435884; TRINITY_DN48952_c0_g1_i1 551 571 AGCGACTCCCTTCGGTCCCAA BLAST psRNATarget
Ll_transcript_435899; TRINITY_DN48952_c0_g1_i4 1177 1197 AGCGACTCCCTTCGGTCCCAA BLAST psRNATarget
Ll_transcript_435891; TRINITY_DN48952_c0_g1_i3 551 571 AGCGACTCCCTTCGGTCCCAA BLAST psRNATarget
Ll_transcript_435889; TRINITY_DN48952_c0_g1_i2 1177 1197 AGCGACTCCCTTCGGTCCCAA BLAST psRNATarget
Ll_transcript_430469; TRINITY_DN52168_c0_g1_i9 30 50 TGGAGTTTTCTTCGGTTCAGA BLAST psRNATarget
Ll_transcript_430498; TRINITY_DN52168_c0_g1_i29 30 50 TGGAGTTTTCTTCGGTTCAGA BLAST psRNATarget
Ll_transcript_430490; TRINITY_DN52168_c0_g1_i23 30 50 TGGAGTTTTCTTCGGTTCAGA BLAST psRNATarget
Ll_transcript_430468; TRINITY_DN52168_c0_g1_i8 30 50 TGGAGTTTTCTTCGGTTCAGA BLAST psRNATarget
Ll_transcript_325660; TRINITY_DN48062_c0_g2_i2 175 195 AAGGGCTCCCTTCGGGGTAAA BLAST psRNATarget
Ll_transcript_325678; TRINITY_DN48062_c0_g2_i6 175 195 AAGGGCTCCCTTCGGGGTAAA BLAST psRNATarget
Ll_transcript_325663; TRINITY_DN48062_c0_g2_i4 334 354 AAGGGCTCCCTTCGGGGTAAA BLAST psRNATarget
Ll_transcript_391285; TRINITY_DN46407_c0_g1_i4 15 35 TATGGTTCCCTGCGGTCCGAA BLAST psRNATarget
Ll_transcript_305664; TRINITY_DN52237_c1_g2_i1 307 327 CCTGGCTTCCTTCGCTCCAAG BLAST psRNATarget
Ll_transcript_391282; TRINITY_DN46407_c0_g1_i1 15 35 TATGGTTCCCTGCGGTCCGAA BLAST psRNATarget
Ll_transcript_303053; TRINITY_DN48279_c1_g4_i5 1051 1071 ATTGGTTCCCATTGGTCCAAA BLAST psRNATarget
Ll_transcript_303046; TRINITY_DN48279_c1_g4_i3 1187 1207 ATTGGTTCCCATTGGTCCAAA BLAST psRNATarget
Ll_transcript_303042; TRINITY_DN48279_c1_g4_i1 1623 1643 ATTGGTTCCCATTGGTCCAAA BLAST psRNATarget
Ll_transcript_303060; TRINITY_DN48279_c1_g4_i8 1623 1643 ATTGGTTCCCATTGGTCCAAA BLAST psRNATarget
Ll_transcript_496109; TRINITY_DN61273_c0_g1_i1 263 283 AAGAGCTTCCTTTGTTCCAAA BLAST psRNATarget
Ll_transcript_485390; TRINITY_DN52320_c2_g2_i4 214 234 TTTGGCTATCTTCGGTCTAAG BLAST psRNATarget

Expression of miRNA 444


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)