miRNA 458 details

Id Micro458
SequenceTCACTCCAACTTTGACCTTCT 
Annotated namesNone; 
Annotated pre-miRNANone

Targets of miRNA 458

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_207819; FTRINITY_DN52640_c4_g2_i3 782 802 AGAAGATCAAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_207812; FTRINITY_DN52640_c4_g2_i1 1287 1307 AGAAGATCAAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_207816; FTRINITY_DN52640_c4_g2_i2 2345 2365 AGAAGATCAAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_144050; FTRINITY_DN51946_c0_g1_i1 1320 1340 TTATGGTCAAAGTTGGGGTGA BLAST Degradome_Seq
Ll_transcript_156039; FTRINITY_DN56599_c0_g1_i1 554 574 ACATGGTTGAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_151750; FTRINITY_DN50576_c0_g2_i1 126 146 AGAGGGTTAAAATTGGAGTGA BLAST Degradome_Seq
Ll_transcript_68122; FTRINITY_DN55080_c1_g1_i2 1863 1883 AAAAGGCCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_68120; FTRINITY_DN55080_c1_g1_i1 2011 2031 AAAAGGCCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_146704; FTRINITY_DN59018_c2_g1_i6 3522 3542 AGAAGGTTGGAGATGGAGTGA BLAST Degradome_Seq
Ll_transcript_146722; FTRINITY_DN59018_c2_g1_i21 3711 3731 AGAAGGTTGGAGATGGAGTGA BLAST Degradome_Seq
Ll_transcript_160947; FTRINITY_DN48794_c0_g2_i2 257 277 AGAAGGCTAAAGTTGGAGTAA BLAST Degradome_Seq
Ll_transcript_160946; FTRINITY_DN48794_c0_g2_i1 357 377 AGAAGGCTAAAGTTGGAGTAA BLAST Degradome_Seq
Ll_transcript_140043; FTRINITY_DN41957_c0_g1_i1 227 247 TTAAGGTCAAAGATGGAGAGA BLAST Degradome_Seq
Ll_transcript_51370; FTRINITY_DN58886_c2_g1_i1 278 298 GAAAGGTCAATGTTGGAGTTA BLAST Degradome_Seq
Ll_transcript_70221; FTRINITY_DN44705_c0_g1_i1 823 843 ATTATGTCAAAGTTGGAGTGT BLAST Degradome_Seq
Ll_transcript_60727; FTRINITY_DN56299_c4_g2_i5 741 761 ACTAGGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_60712; FTRINITY_DN56299_c4_g2_i1 938 958 ACTAGGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_60722; FTRINITY_DN56299_c4_g2_i3 995 1015 ACTAGGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_60725; FTRINITY_DN56299_c4_g2_i4 1046 1066 ACTAGGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_197166; FTRINITY_DN54334_c1_g1_i1 989 1009 AAAGGGTAAAAGTTTGAGTGA BLAST Degradome_Seq
Ll_transcript_192017; FTRINITY_DN55704_c1_g1_i1 1009 1029 CGGGGGTTCAAGTTGGAGTGG BLAST Degradome_Seq
Ll_transcript_192023; FTRINITY_DN55704_c1_g5_i1 1115 1135 CGGGGGTTCAAGTTGGAGTGG BLAST Degradome_Seq
Ll_transcript_192020; FTRINITY_DN55704_c1_g1_i2 1295 1315 CGGGGGTTCAAGTTGGAGTGG BLAST Degradome_Seq
Ll_transcript_69916; FTRINITY_DN44282_c0_g1_i1 184 204 TGGAGTTTGAAGTTGGAGTGT BLAST Degradome_Seq
Ll_transcript_242930; FTRINITY_DN53036_c0_g1_i8 853 873 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_46415; FTRINITY_DN62019_c0_g1_i1 158 178 TGAGAGTCAGAGTTGGAGAGA BLAST Degradome_Seq
Ll_transcript_242924; FTRINITY_DN53036_c0_g1_i2 1071 1091 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_242928; FTRINITY_DN53036_c0_g1_i6 1230 1250 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_242925; FTRINITY_DN53036_c0_g1_i3 1376 1396 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_242923; FTRINITY_DN53036_c0_g1_i1 1388 1408 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_266248; FTRINITY_DN12209_c0_g1_i1 189 209 ATAAGGTCGATATTGGAGTGA BLAST Degradome_Seq
Ll_transcript_249944; FTRINITY_DN55968_c3_g1_i1 382 402 GTTAGGTTAAAGTTGGACTGG BLAST Degradome_Seq
Ll_transcript_83532; FTRINITY_DN56685_c0_g1_i2 51 71 TTAAGGTTAAAGTTCGATTGA BLAST Degradome_Seq
Ll_transcript_407590; TRINITY_DN49571_c5_g6_i2 769 789 TGAAGGTCAAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_407592; TRINITY_DN49571_c5_g3_i3 707 727 AGAAGATCAAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_407585; TRINITY_DN49571_c5_g3_i2 896 916 AGAAGATCAAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_282677; TRINITY_DN46170_c0_g5_i1 1320 1340 TTATGGTCAAAGTTGGGGTGA BLAST Degradome_Seq
Ll_transcript_484164; TRINITY_DN49347_c1_g2_i2 565 585 ACATGGTTGAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_484166; TRINITY_DN49347_c1_g2_i3 565 585 ACATGGTTGAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_495799; TRINITY_DN41828_c0_g1_i3 378 398 AGAGGGTTAAAATTGGAGTGA BLAST Degradome_Seq
Ll_transcript_513119; TRINITY_DN46889_c0_g1_i6 966 986 AAAAGGCCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_513114; TRINITY_DN46889_c0_g1_i1 1734 1754 AAAAGGCCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_513117; TRINITY_DN46889_c0_g1_i4 966 986 AAAAGGCCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_513120; TRINITY_DN46889_c0_g1_i7 2078 2098 AAAAGGCCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_513118; TRINITY_DN46889_c0_g1_i5 1734 1754 AAAAGGCCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_513116; TRINITY_DN46889_c0_g1_i3 1734 1754 AAAAGGCCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_513115; TRINITY_DN46889_c0_g1_i2 2078 2098 AAAAGGCCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_513121; TRINITY_DN46889_c0_g1_i8 2078 2098 AAAAGGCCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_365368; TRINITY_DN46399_c2_g6_i4 738 757 ATAAGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_365382; TRINITY_DN46399_c2_g6_i8 1141 1160 ATAAGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_464348; TRINITY_DN52658_c2_g3_i16 2517 2537 AGAAGGTTGGAGATGGAGTGA BLAST Degradome_Seq
Ll_transcript_464333; TRINITY_DN52658_c2_g3_i2 2570 2590 AGAAGGTTGGAGATGGAGTGA BLAST Degradome_Seq
Ll_transcript_464337; TRINITY_DN52658_c2_g3_i5 2592 2612 AGAAGGTTGGAGATGGAGTGA BLAST Degradome_Seq
Ll_transcript_464358; TRINITY_DN52658_c2_g3_i25 2775 2795 AGAAGGTTGGAGATGGAGTGA BLAST Degradome_Seq
Ll_transcript_432801; TRINITY_DN44503_c0_g3_i2 268 288 AGAAGGCTAAAGTTGGAGTAA BLAST Degradome_Seq
Ll_transcript_432800; TRINITY_DN44503_c0_g3_i1 368 388 AGAAGGCTAAAGTTGGAGTAA BLAST Degradome_Seq
Ll_transcript_348294; TRINITY_DN52468_c3_g1_i1 278 298 GAAAGGTCAATGTTGGAGTTA BLAST Degradome_Seq
Ll_transcript_396687; TRINITY_DN7773_c0_g1_i2 789 809 ATTATGTCAAAGTTGGAGTGT BLAST Degradome_Seq
Ll_transcript_396687; TRINITY_DN7773_c0_g1_i2 870 890 ATTATGTCAAAGTTGGAGTGT BLAST Degradome_Seq
Ll_transcript_396686; TRINITY_DN7773_c0_g1_i1 789 809 ATTATGTCAAAGTTGGAGTGT BLAST Degradome_Seq
Ll_transcript_289593; TRINITY_DN51316_c3_g1_i1 50 70 ATAAGCTCAAGCTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_365368; TRINITY_DN46399_c2_g6_i4 680 700 ACTAGGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_365383; TRINITY_DN46399_c2_g6_i9 680 700 ACTAGGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_365377; TRINITY_DN46399_c2_g6_i6 975 995 ACTAGGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_365382; TRINITY_DN46399_c2_g6_i8 1083 1103 ACTAGGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_365367; TRINITY_DN46399_c2_g6_i3 1032 1052 ACTAGGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_365351; TRINITY_DN46399_c2_g6_i1 1083 1103 ACTAGGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_365381; TRINITY_DN46399_c2_g6_i7 1346 1366 ACTAGGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_365366; TRINITY_DN46399_c2_g6_i2 1468 1488 ACTAGGGTAAGGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_352207; TRINITY_DN43830_c0_g3_i1 1107 1127 AAAGGGTAAAAGTTTGAGTGA BLAST Degradome_Seq
Ll_transcript_471919; TRINITY_DN52004_c2_g1_i3 946 966 ATAGGTTCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_471918; TRINITY_DN52004_c2_g1_i2 946 966 ATAGGTTCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_471921; TRINITY_DN52004_c2_g1_i5 946 966 ATAGGTTCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_471917; TRINITY_DN52004_c2_g1_i1 946 966 ATAGGTTCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_495428; TRINITY_DN43185_c0_g2_i1 134 154 TTAAAGTTAAAGTTGTAGTGA BLAST Degradome_Seq
Ll_transcript_471920; TRINITY_DN52004_c2_g1_i4 946 966 ATAGGTTCCAAGTTGGAGTGA BLAST Degradome_Seq
Ll_transcript_462251; TRINITY_DN51147_c1_g4_i1 173 193 GGAAGGTGAGGGTTGGAATGA BLAST Degradome_Seq
Ll_transcript_319520; TRINITY_DN46272_c1_g6_i2 945 965 CGGGGGTTCAAGTTGGAGTGG BLAST Degradome_Seq
Ll_transcript_450824; TRINITY_DN50694_c2_g3_i9 317 337 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_421826; TRINITY_DN19844_c0_g1_i1 568 588 TGGAGTTTGAAGTTGGAGTGT BLAST Degradome_Seq
Ll_transcript_450803; TRINITY_DN50694_c2_g3_i4 1053 1073 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_450790; TRINITY_DN50694_c2_g3_i2 1299 1319 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_450814; TRINITY_DN50694_c2_g3_i5 1311 1331 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_450816; TRINITY_DN50694_c2_g3_i6 1372 1392 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_359820; TRINITY_DN47665_c3_g7_i1 186 206 TGATGGTTAGAGGTGGAGTGA BLAST Degradome_Seq
Ll_transcript_450818; TRINITY_DN50694_c2_g3_i7 2135 2155 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_450785; TRINITY_DN50694_c2_g3_i1 2147 2167 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_450802; TRINITY_DN50694_c2_g3_i3 2208 2228 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_450819; TRINITY_DN50694_c2_g3_i8 2242 2262 TGGGGGATAAAGTTGGAGTGC BLAST Degradome_Seq
Ll_transcript_319506; TRINITY_DN46272_c1_g3_i2 125 145 CAGGGGTTCAAGTTGGAGTGG BLAST Degradome_Seq

Expression of miRNA 458


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)