miRNA 462 details

Id Micro462
SequenceTGCTATCCATCCTGAGTTTCA 
Annotated namesNone; 
Annotated pre-miRNAmdm-MIR390f

Targets of miRNA 462

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_78347; FTRINITY_DN85751_c0_g1_i1 172 192 GCAGACTTAGGATGGATAGCT BLAST Degradome_Seq
Ll_transcript_45453; FTRINITY_DN46265_c0_g1_i1 3 23 TAAAGCTCAGGAGGGATAGCG BLAST Degradome_Seq
Ll_transcript_45168; FTRINITY_DN54182_c6_g1_i1 88 108 TTAAGCTCAGGAGGGATAGCG BLAST Degradome_Seq
Ll_transcript_43886; FTRINITY_DN54151_c4_g1_i1 118 138 TTAAGCTCAGGAGGGATAGCG BLAST Degradome_Seq
Ll_transcript_163422; FTRINITY_DN53218_c0_g3_i11 274 294 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_163415; FTRINITY_DN53218_c0_g3_i5 274 294 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_163420; FTRINITY_DN53218_c0_g3_i9 372 392 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_163440; FTRINITY_DN53218_c0_g3_i21 372 392 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_163438; FTRINITY_DN53218_c0_g3_i20 274 294 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_163413; FTRINITY_DN53218_c0_g3_i3 372 392 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_163424; FTRINITY_DN53218_c0_g3_i12 274 294 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_163418; FTRINITY_DN53218_c0_g3_i8 752 772 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_163416; FTRINITY_DN53218_c0_g3_i6 372 392 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_163417; FTRINITY_DN53218_c0_g3_i7 752 772 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_163437; FTRINITY_DN53218_c0_g3_i19 752 772 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_163427; FTRINITY_DN53218_c0_g3_i15 752 772 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_20113; FTRINITY_DN55163_c0_g1_i2 343 363 GCACAGTTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_31900; FTRINITY_DN58426_c1_g6_i1 122 142 ACAGACTCAGGGTTGATAGTA BLAST Degradome_Seq
Ll_transcript_229167; FTRINITY_DN52714_c0_g1_i1 143 163 TGGAACTCAGCATAGATAGCA BLAST Degradome_Seq
Ll_transcript_229168; FTRINITY_DN52714_c0_g1_i2 1547 1567 TGGAACTCAGCATAGATAGCA BLAST Degradome_Seq
Ll_transcript_165945; FTRINITY_DN80012_c0_g1_i1 124 144 TGATATTCAGGAAGGATGGCA BLAST Degradome_Seq
Ll_transcript_147004; FTRINITY_DN59082_c4_g2_i2 173 193 AGAAATTTGGGAGGGATGGCA BLAST Degradome_Seq
Ll_transcript_181341; FTRINITY_DN53502_c2_g4_i1 811 831 TTAAATTTGGGAAGGGTAGCA BLAST Degradome_Seq
Ll_transcript_233561; FTRINITY_DN71541_c0_g1_i1 31 51 CCAAACTCAGGGGGGATACCA BLAST Degradome_Seq
Ll_transcript_14763; FTRINITY_DN59268_c0_g1_i1 147 167 GAAGGCTCAGGATGGATTGTG BLAST Degradome_Seq
Ll_transcript_168286; FTRINITY_DN57341_c2_g2_i9 614 634 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_168276; FTRINITY_DN57341_c2_g2_i7 2262 2282 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_168269; FTRINITY_DN57341_c2_g2_i5 2262 2282 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_111470; FTRINITY_DN55430_c4_g2_i4 1802 1822 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_168258; FTRINITY_DN57341_c2_g2_i1 2262 2282 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_168281; FTRINITY_DN57341_c2_g2_i8 2262 2282 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_168261; FTRINITY_DN57341_c2_g2_i2 2332 2352 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_111487; FTRINITY_DN55430_c4_g2_i13 2497 2517 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_334964; TRINITY_DN74460_c0_g1_i1 142 162 GCAGACTTAGGATGGATAGCT BLAST Degradome_Seq
Ll_transcript_366924; TRINITY_DN46364_c1_g1_i2 114 134 TTAAGCTCAGGAGGGATAGCG BLAST Degradome_Seq
Ll_transcript_282897; TRINITY_DN46151_c3_g5_i1 106 126 TTAAGCTCAGGAGGGATAGCG BLAST Degradome_Seq
Ll_transcript_419493; TRINITY_DN48752_c2_g1_i6 349 369 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_419509; TRINITY_DN48752_c2_g1_i9 447 467 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_419504; TRINITY_DN48752_c2_g1_i8 349 369 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_419492; TRINITY_DN48752_c2_g1_i5 349 369 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_419500; TRINITY_DN48752_c2_g1_i7 447 467 TCACAATTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_424488; TRINITY_DN47946_c3_g1_i8 343 363 GCACAGTTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_424478; TRINITY_DN47946_c3_g1_i3 343 363 GCACAGTTAGGATGGATAGCA BLAST Degradome_Seq
Ll_transcript_372697; TRINITY_DN47099_c1_g1_i23 1966 1986 TGGAACTTAGGGTGGATAACA BLAST Degradome_Seq
Ll_transcript_372666; TRINITY_DN47099_c1_g1_i1 1966 1986 TGGAACTTAGGGTGGATAACA BLAST Degradome_Seq
Ll_transcript_372690; TRINITY_DN47099_c1_g1_i17 2126 2146 TGGAACTTAGGGTGGATAACA BLAST Degradome_Seq
Ll_transcript_372681; TRINITY_DN47099_c1_g1_i11 2224 2244 TGGAACTTAGGGTGGATAACA BLAST Degradome_Seq
Ll_transcript_372673; TRINITY_DN47099_c1_g1_i6 2126 2146 TGGAACTTAGGGTGGATAACA BLAST Degradome_Seq
Ll_transcript_372701; TRINITY_DN47099_c1_g1_i27 2224 2244 TGGAACTTAGGGTGGATAACA BLAST Degradome_Seq
Ll_transcript_372695; TRINITY_DN47099_c1_g1_i21 2126 2146 TGGAACTTAGGGTGGATAACA BLAST Degradome_Seq
Ll_transcript_333363; TRINITY_DN73235_c0_g1_i1 213 233 TGGAACTCAGCATAGATAGCA BLAST Degradome_Seq
Ll_transcript_462527; TRINITY_DN75526_c0_g1_i1 112 132 GAAGGCTCAGGATGGATTGTG BLAST Degradome_Seq
Ll_transcript_406746; TRINITY_DN49541_c0_g2_i3 911 931 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_344792; TRINITY_DN50460_c2_g3_i29 1103 1123 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_406763; TRINITY_DN49541_c0_g2_i19 1534 1554 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_406757; TRINITY_DN49541_c0_g2_i13 1649 1669 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_406752; TRINITY_DN49541_c0_g2_i9 1649 1669 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_344788; TRINITY_DN50460_c2_g3_i25 2322 2342 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_406755; TRINITY_DN49541_c0_g2_i12 1536 1556 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_406754; TRINITY_DN49541_c0_g2_i11 1790 1810 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_406749; TRINITY_DN49541_c0_g2_i6 1790 1810 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_406753; TRINITY_DN49541_c0_g2_i10 1790 1810 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_344781; TRINITY_DN50460_c2_g3_i19 2267 2287 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_406762; TRINITY_DN49541_c0_g2_i18 1649 1669 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_344787; TRINITY_DN50460_c2_g3_i24 2337 2357 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_406750; TRINITY_DN49541_c0_g2_i7 1790 1810 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_344784; TRINITY_DN50460_c2_g3_i22 2267 2287 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_344774; TRINITY_DN50460_c2_g3_i12 2267 2287 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_344768; TRINITY_DN50460_c2_g3_i6 2322 2342 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_344793; TRINITY_DN50460_c2_g3_i30 2337 2357 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_406751; TRINITY_DN49541_c0_g2_i8 1649 1669 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_406760; TRINITY_DN49541_c0_g2_i16 1790 1810 ACCAACTCAGGATGGTTGGTA BLAST Degradome_Seq
Ll_transcript_344770; TRINITY_DN50460_c2_g3_i8 2267 2287 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq
Ll_transcript_344789; TRINITY_DN50460_c2_g3_i26 2337 2357 TTAAACTTGGGGTGGAAGGCA BLAST Degradome_Seq

Expression of miRNA 462


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)