miRNA 474 details

Id Micro474
SequenceAATAGGGCACATCTCTCATGG 
Annotated namesNone; 
Annotated pre-miRNANone

Targets of miRNA 474

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_189159; FTRINITY_DN56798_c0_g1_i4 3122 3142 GGATGAGAGATGTGCCCTTTT BLAST Degradome_Seq
Ll_transcript_189154; FTRINITY_DN56798_c0_g1_i2 3142 3162 GGATGAGAGATGTGCCCTTTT BLAST Degradome_Seq
Ll_transcript_189155; FTRINITY_DN56798_c0_g1_i3 3249 3269 GGATGAGAGATGTGCCCTTTT BLAST Degradome_Seq
Ll_transcript_189171; FTRINITY_DN56798_c0_g1_i11 3548 3568 GGATGAGAGATGTGCCCTTTT BLAST Degradome_Seq
Ll_transcript_110253; FTRINITY_DN55409_c0_g1_i2 141 161 ATATGAGAGATGTGTTTTGTT BLAST Degradome_Seq
Ll_transcript_110252; FTRINITY_DN55409_c0_g1_i1 141 161 ATATGAGAGATGTGTTTTGTT BLAST Degradome_Seq
Ll_transcript_110261; FTRINITY_DN55409_c0_g1_i9 767 787 ATATGAGAGATGTGTTTTGTT BLAST Degradome_Seq
Ll_transcript_110256; FTRINITY_DN55409_c0_g1_i5 767 787 ATATGAGAGATGTGTTTTGTT BLAST Degradome_Seq
Ll_transcript_97444; FTRINITY_DN48406_c0_g1_i2 1617 1637 CAATGAGAGATCTGTTCTATT BLAST Degradome_Seq
Ll_transcript_97443; FTRINITY_DN48406_c0_g1_i1 1801 1821 CAATGAGAGATCTGTTCTATT BLAST Degradome_Seq
Ll_transcript_273672; FTRINITY_DN54256_c0_g1_i1 931 951 AAATAGGAGATGTGCTTTATT BLAST Degradome_Seq
Ll_transcript_273680; FTRINITY_DN54256_c0_g1_i8 1083 1103 AAATAGGAGATGTGCTTTATT BLAST Degradome_Seq
Ll_transcript_74934; FTRINITY_DN55511_c1_g9_i1 1596 1616 GAATGTGAAATGTGCCCTATT BLAST Degradome_Seq
Ll_transcript_74938; FTRINITY_DN55511_c1_g9_i2 1596 1616 GAATGTGAAATGTGCCCTATT BLAST Degradome_Seq
Ll_transcript_36944; FTRINITY_DN58928_c1_g1_i1 4354 4374 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_36949; FTRINITY_DN58928_c1_g1_i6 4430 4450 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_36962; FTRINITY_DN58928_c1_g1_i17 4507 4527 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_36963; FTRINITY_DN58928_c1_g1_i18 4529 4549 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_36959; FTRINITY_DN58928_c1_g1_i14 4637 4657 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_36956; FTRINITY_DN58928_c1_g1_i12 4604 4624 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_36946; FTRINITY_DN58928_c1_g1_i3 4680 4700 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_36961; FTRINITY_DN58928_c1_g1_i16 4714 4734 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_36965; FTRINITY_DN58928_c1_g1_i20 4887 4907 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_36950; FTRINITY_DN58928_c1_g1_i7 4964 4984 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_36955; FTRINITY_DN58928_c1_g1_i11 5753 5773 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_36945; FTRINITY_DN58928_c1_g1_i2 5986 6006 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_36964; FTRINITY_DN58928_c1_g1_i19 6036 6056 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_75727; FTRINITY_DN55517_c0_g2_i1 247 267 GAGTGAGAGGTATGCTCTATT BLAST Degradome_Seq
Ll_transcript_114455; FTRINITY_DN59339_c1_g1_i6 649 669 GAGTGAGAGGTATGCTCTATT BLAST Degradome_Seq
Ll_transcript_260409; FTRINITY_DN57906_c2_g4_i1 301 321 TCATGGGAGATGTGCTCTACA BLAST Degradome_Seq
Ll_transcript_258094; FTRINITY_DN57946_c0_g3_i2 255 275 CCATGAGAGATGGCTCCTATT BLAST Degradome_Seq
Ll_transcript_258089; FTRINITY_DN57946_c0_g3_i1 255 275 CCATGAGAGATGGCTCCTATT BLAST Degradome_Seq
Ll_transcript_258113; FTRINITY_DN57946_c0_g3_i5 488 508 CCATGAGAGATGGCTCCTATT BLAST Degradome_Seq
Ll_transcript_258101; FTRINITY_DN57946_c0_g3_i4 783 803 CCATGAGAGATGGCTCCTATT BLAST Degradome_Seq
Ll_transcript_258100; FTRINITY_DN57946_c0_g3_i3 783 803 CCATGAGAGATGGCTCCTATT BLAST Degradome_Seq
Ll_transcript_221983; FTRINITY_DN70928_c0_g1_i1 290 310 TCGTGAGGGATGTGACCTATG BLAST Degradome_Seq
Ll_transcript_174378; FTRINITY_DN52190_c0_g1_i6 3610 3630 TCGTGGGAGTTGTGCCCTATG BLAST Degradome_Seq
Ll_transcript_191277; FTRINITY_DN55758_c1_g1_i3 458 478 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_191279; FTRINITY_DN55758_c1_g1_i5 458 478 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_191275; FTRINITY_DN55758_c1_g1_i2 612 632 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_191278; FTRINITY_DN55758_c1_g1_i4 1215 1235 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_191274; FTRINITY_DN55758_c1_g1_i1 1215 1235 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_10843; FTRINITY_DN56812_c5_g12_i1 3654 3674 TCATGGGTAATGTGTCCTATT BLAST Degradome_Seq
Ll_transcript_124583; FTRINITY_DN28028_c0_g1_i1 119 139 ACATGAAGGATGTGCTCCATT BLAST Degradome_Seq
Ll_transcript_68907; FTRINITY_DN55072_c4_g4_i1 661 681 ATTTGAGAGGTGTGTTCTATG BLAST Degradome_Seq
Ll_transcript_68604; FTRINITY_DN55087_c0_g2_i5 483 503 ACATGTGAGATGAGCTTTATT BLAST Degradome_Seq
Ll_transcript_68607; FTRINITY_DN55087_c0_g2_i8 759 779 ACATGTGAGATGAGCTTTATT BLAST Degradome_Seq
Ll_transcript_68600; FTRINITY_DN55087_c0_g2_i2 768 788 ACATGTGAGATGAGCTTTATT BLAST Degradome_Seq
Ll_transcript_92189; FTRINITY_DN54833_c1_g4_i1 197 217 ACATCAGGGATTTGCCTTATT BLAST Degradome_Seq
Ll_transcript_92198; FTRINITY_DN54833_c1_g4_i4 197 217 ACATCAGGGATTTGCCTTATT BLAST Degradome_Seq
Ll_transcript_92197; FTRINITY_DN54833_c1_g4_i3 197 217 ACATCAGGGATTTGCCTTATT BLAST Degradome_Seq
Ll_transcript_92202; FTRINITY_DN54833_c1_g4_i5 197 217 ACATCAGGGATTTGCCTTATT BLAST Degradome_Seq
Ll_transcript_105829; FTRINITY_DN52985_c0_g3_i1 438 458 TTATGGAAGATGTACCTTATT BLAST Degradome_Seq
Ll_transcript_105846; FTRINITY_DN52985_c0_g3_i4 1246 1266 TTATGGAAGATGTACCTTATT BLAST Degradome_Seq
Ll_transcript_128299; FTRINITY_DN53465_c1_g1_i1 48 68 AAGTGGGAGAAGTGCTTTATT BLAST Degradome_Seq
Ll_transcript_76014; FTRINITY_DN55509_c1_g8_i2 715 735 ATACGAGAGATGTGTGCTGTT BLAST Degradome_Seq
Ll_transcript_76010; FTRINITY_DN55509_c1_g8_i1 1399 1419 ATACGAGAGATGTGTGCTGTT BLAST Degradome_Seq
Ll_transcript_76018; FTRINITY_DN55509_c1_g8_i3 1597 1617 ATACGAGAGATGTGTGCTGTT BLAST Degradome_Seq
Ll_transcript_120739; FTRINITY_DN58235_c0_g2_i8 37 57 AAATGGAAGATGTGTCCTGTG BLAST Degradome_Seq
Ll_transcript_120729; FTRINITY_DN58235_c0_g2_i3 37 57 AAATGGAAGATGTGTCCTGTG BLAST Degradome_Seq
Ll_transcript_36090; FTRINITY_DN58710_c0_g1_i28 3942 3962 GACTTAGAGATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_212688; FTRINITY_DN58347_c1_g4_i1 134 154 AAATGGAAGATGTGTCCTGTG BLAST Degradome_Seq
Ll_transcript_36072; FTRINITY_DN58710_c0_g1_i13 4165 4185 GACTTAGAGATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_36063; FTRINITY_DN58710_c0_g1_i5 4223 4243 GACTTAGAGATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_120738; FTRINITY_DN58235_c0_g2_i7 37 57 AAATGGAAGATGTGTCCTGTG BLAST Degradome_Seq
Ll_transcript_120741; FTRINITY_DN58235_c0_g2_i9 37 57 AAATGGAAGATGTGTCCTGTG BLAST Degradome_Seq
Ll_transcript_120716; FTRINITY_DN58235_c0_g2_i1 37 57 AAATGGAAGATGTGTCCTGTG BLAST Degradome_Seq
Ll_transcript_120736; FTRINITY_DN58235_c0_g2_i6 37 57 AAATGGAAGATGTGTCCTGTG BLAST Degradome_Seq
Ll_transcript_488882; TRINITY_DN50351_c0_g3_i9 3118 3138 GGATGAGAGATGTGCCCTTTT BLAST Degradome_Seq
Ll_transcript_488875; TRINITY_DN50351_c0_g3_i5 3170 3190 GGATGAGAGATGTGCCCTTTT BLAST Degradome_Seq
Ll_transcript_488887; TRINITY_DN50351_c0_g3_i13 3225 3245 GGATGAGAGATGTGCCCTTTT BLAST Degradome_Seq
Ll_transcript_488890; TRINITY_DN50351_c0_g3_i14 3277 3297 GGATGAGAGATGTGCCCTTTT BLAST Degradome_Seq
Ll_transcript_369815; TRINITY_DN48682_c0_g1_i4 134 154 ATATGAGAGATGTGTTTTGTT BLAST Degradome_Seq
Ll_transcript_369816; TRINITY_DN48682_c0_g1_i5 134 154 ATATGAGAGATGTGTTTTGTT BLAST Degradome_Seq
Ll_transcript_369818; TRINITY_DN48682_c0_g1_i7 134 154 ATATGAGAGATGTGTTTTGTT BLAST Degradome_Seq
Ll_transcript_369814; TRINITY_DN48682_c0_g1_i3 760 780 ATATGAGAGATGTGTTTTGTT BLAST Degradome_Seq
Ll_transcript_369820; TRINITY_DN48682_c0_g1_i9 760 780 ATATGAGAGATGTGTTTTGTT BLAST Degradome_Seq
Ll_transcript_340343; TRINITY_DN44149_c0_g1_i1 2917 2937 CAATGAGAGATCTGTTCTATT BLAST Degradome_Seq
Ll_transcript_291295; TRINITY_DN49171_c1_g1_i3 930 950 AAATAGGAGATGTGCTTTATT BLAST Degradome_Seq
Ll_transcript_291287; TRINITY_DN49171_c1_g1_i1 930 950 AAATAGGAGATGTGCTTTATT BLAST Degradome_Seq
Ll_transcript_291324; TRINITY_DN49171_c1_g1_i11 930 950 AAATAGGAGATGTGCTTTATT BLAST Degradome_Seq
Ll_transcript_291322; TRINITY_DN49171_c1_g1_i10 1082 1102 AAATAGGAGATGTGCTTTATT BLAST Degradome_Seq
Ll_transcript_307016; TRINITY_DN52248_c0_g1_i12 4809 4829 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307039; TRINITY_DN52248_c0_g1_i33 5042 5062 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307015; TRINITY_DN52248_c0_g1_i11 5092 5112 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307043; TRINITY_DN52248_c0_g1_i36 5096 5116 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307042; TRINITY_DN52248_c0_g1_i35 4885 4905 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307031; TRINITY_DN52248_c0_g1_i25 5118 5138 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307009; TRINITY_DN52248_c0_g1_i5 5168 5188 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307019; TRINITY_DN52248_c0_g1_i14 5059 5079 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307012; TRINITY_DN52248_c0_g1_i8 5096 5116 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307033; TRINITY_DN52248_c0_g1_i27 5325 5345 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307029; TRINITY_DN52248_c0_g1_i24 5329 5349 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307006; TRINITY_DN52248_c0_g1_i2 5135 5155 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307044; TRINITY_DN52248_c0_g1_i37 5379 5399 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307011; TRINITY_DN52248_c0_g1_i7 5401 5421 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307023; TRINITY_DN52248_c0_g1_i18 5346 5366 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_307040; TRINITY_DN52248_c0_g1_i34 5612 5632 TGTGGAGGGATGTGCCCTGTT BLAST Degradome_Seq
Ll_transcript_493333; TRINITY_DN52880_c0_g3_i2 2856 2876 GAGTGAGAGGTATGCTCTATT BLAST Degradome_Seq
Ll_transcript_310555; TRINITY_DN47116_c0_g2_i1 306 326 TCATGGGAGATGTGCTCTACA BLAST Degradome_Seq
Ll_transcript_454819; TRINITY_DN49772_c0_g4_i6 1023 1043 CCATGAGAGATGGCTCCTATT BLAST Degradome_Seq
Ll_transcript_454825; TRINITY_DN49772_c0_g4_i7 1749 1769 CCATGAGAGATGGCTCCTATT BLAST Degradome_Seq
Ll_transcript_454793; TRINITY_DN49772_c0_g4_i2 1749 1769 CCATGAGAGATGGCTCCTATT BLAST Degradome_Seq
Ll_transcript_454818; TRINITY_DN49772_c0_g4_i5 2180 2200 CCATGAGAGATGGCTCCTATT BLAST Degradome_Seq
Ll_transcript_454807; TRINITY_DN49772_c0_g4_i4 2180 2200 CCATGAGAGATGGCTCCTATT BLAST Degradome_Seq
Ll_transcript_454774; TRINITY_DN49772_c0_g4_i1 2180 2200 CCATGAGAGATGGCTCCTATT BLAST Degradome_Seq
Ll_transcript_307618; TRINITY_DN62318_c0_g1_i1 334 354 TCGTGAGGGATGTGACCTATG BLAST Degradome_Seq
Ll_transcript_375922; TRINITY_DN47708_c0_g2_i2 350 370 TCGTGGGAGTTGTGCCCTATG BLAST Degradome_Seq
Ll_transcript_350866; TRINITY_DN52439_c1_g1_i7 45 65 TCATGAGAAGTGTGTTTTATT BLAST Degradome_Seq
Ll_transcript_328092; TRINITY_DN48087_c1_g1_i9 206 226 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_328069; TRINITY_DN48087_c1_g1_i1 614 634 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_328079; TRINITY_DN48087_c1_g1_i5 657 677 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_328075; TRINITY_DN48087_c1_g1_i4 503 523 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_328074; TRINITY_DN48087_c1_g1_i3 1260 1280 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_328091; TRINITY_DN48087_c1_g1_i8 503 523 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_328083; TRINITY_DN48087_c1_g1_i6 627 647 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_328093; TRINITY_DN48087_c1_g1_i10 657 677 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_328095; TRINITY_DN48087_c1_g1_i11 1260 1280 TTGTGAGACATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_410358; TRINITY_DN51618_c1_g2_i1 166 186 CTATGAAAAATGTGTCTTATT BLAST Degradome_Seq
Ll_transcript_310427; TRINITY_DN47112_c2_g2_i2 3530 3550 TCATGGGTAATGTGTCCTATT BLAST Degradome_Seq
Ll_transcript_410304; TRINITY_DN51639_c0_g1_i3 662 682 ATTTGAGAGGTGTGTTCTATG BLAST Degradome_Seq
Ll_transcript_410295; TRINITY_DN51639_c0_g1_i1 955 975 ATTTGAGAGGTGTGTTCTATG BLAST Degradome_Seq
Ll_transcript_336344; TRINITY_DN40202_c0_g1_i1 756 776 ACATGTGAGATGAGCTTTATT BLAST Degradome_Seq
Ll_transcript_447156; TRINITY_DN51813_c0_g1_i6 197 217 ACATCAGGGATTTGCCTTATT BLAST Degradome_Seq
Ll_transcript_447153; TRINITY_DN51813_c0_g1_i3 197 217 ACATCAGGGATTTGCCTTATT BLAST Degradome_Seq
Ll_transcript_447152; TRINITY_DN51813_c0_g1_i2 197 217 ACATCAGGGATTTGCCTTATT BLAST Degradome_Seq
Ll_transcript_470598; TRINITY_DN33205_c0_g1_i1 240 260 AAATGAGGGATGTGTTTTGTA BLAST Degradome_Seq
Ll_transcript_418294; TRINITY_DN46091_c1_g1_i2 525 545 TTATGGAAGATGTACCTTATT BLAST Degradome_Seq
Ll_transcript_372204; TRINITY_DN47028_c3_g1_i7 723 743 ATACGAGAGATGTGTGCTGTT BLAST Degradome_Seq
Ll_transcript_372197; TRINITY_DN47028_c3_g1_i1 853 873 ATACGAGAGATGTGTGCTGTT BLAST Degradome_Seq
Ll_transcript_372207; TRINITY_DN47028_c3_g1_i10 1040 1060 ATACGAGAGATGTGTGCTGTT BLAST Degradome_Seq
Ll_transcript_372200; TRINITY_DN47028_c3_g1_i4 1418 1438 ATACGAGAGATGTGTGCTGTT BLAST Degradome_Seq
Ll_transcript_431846; TRINITY_DN52158_c0_g1_i3 4309 4329 GACTTAGAGATGTGCCTTATG BLAST Degradome_Seq
Ll_transcript_471691; TRINITY_DN52095_c2_g4_i1 408 428 AAATGGAAGATGTGTCCTGTG BLAST Degradome_Seq
Ll_transcript_517009; TRINITY_DN51261_c1_g2_i6 1026 1047 AAATGATGAGATGTGCCCTCTT BLAST Degradome_Seq

Expression of miRNA 474


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)