Transcript | Ll_transcript_424122 |
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CDS coordinates | 103-5601 (+) |
Peptide sequence | MSEPEPETVSMAPLVASLSNSLHQVPPSAVPAMLDCILLSTGSSPHSLFASLLHHFLPLLEDISKEGDNLDSDKLLHLQSLWATFCHLLKKIGDDSDALQSFIWRCFLPLAKALQASQHALLNQITESFMDVVIETHTWKVLKGTFVPIFLRSIGLSMGMLHNGDLDFYEWSSKSFFQGSYDVATDPLIEKELVPSYSINFSLPTSCSVLCVILEAALDYLQTDPICKSSEEKGCFADNFVKTLIWELCNMIERMLLQSSEHRSCGVGFLLPIVLKAFPTKSSFEVSIRGQKHVFSWEHFFIKMWNCCRTLLSTGPLERREAFNVLSLYLPFSLSTKESKNAVEDFDIREEKEFWDEIRMGLVDKESLVRKQSLHILKMTLNLQEGTNSMPSILKQETEGKHSVPLGLTKKEQWAYKEAKSLGVGKISTSDDLIFDNKQYWDAFVLLYEMLEEYGTHLVEAAWNHQVSLLLHFSGSCVRSNICKVHENQVEIYGETFSWLSILWERGLCHDNPQVRCLIMQSFLDINWDNYGNYINSVPEAFVLGPFLQGLNDPIHHKEFGVKGVYMSKVIEGAARFLHHYANFVDPRKHIAFLCNLASTAKHQPFGRAGLMGLAECIASAANGIGRVILARTKSFKGTFPVEPVSGVANPMDKKELLDVFRYVVESSKQHFNPSYRQQVCGKILEAAVSVVCTFDIPLEILLLFISAFPREFTDYGGQLRVTVQRWLSGCGYKDSCANCCSNEMKLWNCLYDFPHSFVYNHLSNDASLNYDDDDLSAWEFEANRWARVLFLAIKEEHPLEPILMFVQKNGPNILEQNHDTRYITVKFLILAMSLILELHRIKERVVESGNKAKKSAFPGIVDDLSLIGGVSEKLVDKYLYLLDDLVQFANQSCSIFWSDVIAENTALPGAVKGKLGGPSQRRLSISATTAVLQAIMSVKAISSILTFCKQVKSDAPYNSALTFLWQFFWRTTRSPASCSEIGAEICLAAYEALVSVLRVLASTNFPQSLHLIEENEQLLSETDGMPQLDSMFASFIQNMNDLLGTGVLARTRRAVLLDIKWACLESLLSIPSYTLKSGFHLVENHTFFSDGTLRCIFNDLVQSLENAGESSVLSMLRSLRMLIELVGKVMSTEVISQSHVIDTQMMWNLVRSSWILHISCKKRRVASISALLSSVLHPLVFNDEHMHQTDNGPGPLKWFIENLLEEGTKSPRTIRLAALHLTGLWLLNPRIIKFYMKELKLLSLYGSVAFDEDFEAELADNNDARLEVSVLAMSPDSELTEAFINTELYARVSVAVLFHKLADLASMVGLPNEDANCIAALESGKLFLLELLDSAVNDKDLVKELYKKYSAIHRRKIRAWQIICVLSPFVDKDIVEKVFDYLYTSLNRNNLPAVRQYLETFAINIYLKFPSLVKEQLVPILRDYDTKQQALSSYVFIAANVILNSSKDVQPRHLDELFPPLVPLLTSHHHSLRGFTQLLVYQILLKLFPLLDSCSSEMLPLEKRCFVDLKMYLEKNSDCARLRASMVGYLDAYNPNSSATPAGIFVNRVEEVDFECVPTSLMEQLLKFLNDAREELRSSMAKDVVTIRNETLKFNGDKNCKESFSGGIEGAMPKDMPSDFQKKVTLTKHDKGDAEAEIRFRNDETYRKMAEIERDDLLLDQMLQSRRSSLDRLKASRQNIILVASLLDRIPNLAGLARTCEVFRASGLAIADTSIISDKQFQLISVTAEKWVPITEVPVDSLKAYLQKKKREGFSILGLEQTANSVPLDQYNFPKNTVLVLGREKEGIPVDIIHILDDCIEIPQFGVVRSLNVHVSGAIALWEYTRQQRSQ* |
ORF Type | complete |
Blastp | Probable methyltransferase TARBP1 from Homo with 55.49% of identity |
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Blastx | Probable methyltransferase TARBP1 from Homo with 48.17% of identity |
Eggnog | Methyltransferase(COG0566) |
Kegg | Link to kegg annotations (6894) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421761.1) |
Pfam | SpoU rRNA Methylase family (PF00588.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer