miRNA 483 details

Id Micro483
SequenceATTAGATCATGTGGCAGTTTCACC 
Annotated namesNone; 
Annotated pre-miRNAlja-MIR167b

Targets of miRNA 483

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_98479; FTRINITY_DN57194_c0_g4_i7 146 169 GCTCTAACTGCTATATGATCTGAT BLAST Degradome_Seq
Ll_transcript_193270; FTRINITY_DN55709_c1_g2_i1 264 287 GATGGAACTGACACATGATTTGAT BLAST Degradome_Seq
Ll_transcript_57312; FTRINITY_DN57883_c1_g1_i1 344 367 GCTCTAACTGCTATATGATTTGAT BLAST Degradome_Seq
Ll_transcript_131567; FTRINITY_DN57562_c3_g2_i6 732 755 ACTGAAACTGCCACATGGCTTAAT BLAST Degradome_Seq
Ll_transcript_131569; FTRINITY_DN57562_c3_g2_i8 732 755 ACTGAAACTGCCACATGGCTTAAT BLAST Degradome_Seq
Ll_transcript_131568; FTRINITY_DN57562_c3_g2_i7 732 755 ACTGAAACTGCCACATGGCTTAAT BLAST Degradome_Seq
Ll_transcript_197910; FTRINITY_DN24593_c0_g1_i1 176 199 CACTAAACTACCACAAGATCTAAT BLAST Degradome_Seq
Ll_transcript_233351; FTRINITY_DN71752_c0_g1_i1 153 176 TCACAAATTGGTGCATGATCTAAT BLAST Degradome_Seq
Ll_transcript_165793; FTRINITY_DN25249_c0_g1_i1 792 815 AGAAAAAGTGTCATGTGATCTAAT BLAST Degradome_Seq
Ll_transcript_211072; FTRINITY_DN58329_c0_g4_i1 278 301 GCAGAAATTGTCATATTATCTAAT BLAST Degradome_Seq
Ll_transcript_72345; FTRINITY_DN56007_c4_g2_i1 389 412 GATGGGGATGTTACATGATCTAAT BLAST Degradome_Seq
Ll_transcript_195430; FTRINITY_DN54376_c3_g4_i3 1380 1403 GGTTGAACTGACATGTGGTTTAAT BLAST Degradome_Seq
Ll_transcript_42717; FTRINITY_DN54106_c1_g2_i1 143 166 GGTAAGGTTGCCACATGAACTAGT BLAST Degradome_Seq
Ll_transcript_112628; FTRINITY_DN55433_c3_g1_i11 507 530 GCTGAAACTGCCACCTCATCTGAT BLAST Degradome_Seq
Ll_transcript_112625; FTRINITY_DN55433_c3_g1_i8 507 530 GCTGAAACTGCCACCTCATCTGAT BLAST Degradome_Seq
Ll_transcript_112623; FTRINITY_DN55433_c3_g1_i6 507 530 GCTGAAACTGCCACCTCATCTGAT BLAST Degradome_Seq
Ll_transcript_112621; FTRINITY_DN55433_c3_g1_i4 507 530 GCTGAAACTGCCACCTCATCTGAT BLAST Degradome_Seq
Ll_transcript_112631; FTRINITY_DN55433_c3_g1_i14 507 530 GCTGAAACTGCCACCTCATCTGAT BLAST Degradome_Seq
Ll_transcript_112618; FTRINITY_DN55433_c3_g1_i1 507 530 GCTGAAACTGCCACCTCATCTGAT BLAST Degradome_Seq
Ll_transcript_112620; FTRINITY_DN55433_c3_g1_i3 507 530 GCTGAAACTGCCACCTCATCTGAT BLAST Degradome_Seq
Ll_transcript_112619; FTRINITY_DN55433_c3_g1_i2 507 530 GCTGAAACTGCCACCTCATCTGAT BLAST Degradome_Seq
Ll_transcript_112627; FTRINITY_DN55433_c3_g1_i10 507 530 GCTGAAACTGCCACCTCATCTGAT BLAST Degradome_Seq
Ll_transcript_2064; FTRINITY_DN54618_c5_g6_i1 318 341 TTTGGGGCTGCTACATGTTTTAAT BLAST Degradome_Seq
Ll_transcript_203262; FTRINITY_DN56927_c2_g5_i5 1224 1247 ATTGAAACTACCATGTGATTTGGT BLAST Degradome_Seq
Ll_transcript_203247; FTRINITY_DN56927_c2_g5_i3 1311 1334 ATTGAAACTACCATGTGATTTGGT BLAST Degradome_Seq
Ll_transcript_203228; FTRINITY_DN56927_c2_g5_i1 1419 1442 ATTGAAACTACCATGTGATTTGGT BLAST Degradome_Seq
Ll_transcript_203245; FTRINITY_DN56927_c2_g5_i2 1724 1747 ATTGAAACTACCATGTGATTTGGT BLAST Degradome_Seq
Ll_transcript_203254; FTRINITY_DN56927_c2_g5_i4 1811 1834 ATTGAAACTACCATGTGATTTGGT BLAST Degradome_Seq
Ll_transcript_203266; FTRINITY_DN56927_c2_g5_i7 1910 1933 ATTGAAACTACCATGTGATTTGGT BLAST Degradome_Seq
Ll_transcript_203263; FTRINITY_DN56927_c2_g5_i6 2224 2247 ATTGAAACTACCATGTGATTTGGT BLAST Degradome_Seq
Ll_transcript_154613; FTRINITY_DN56586_c0_g2_i9 2388 2411 GGAGGAATTATTGCATGGTCTAAT BLAST Degradome_Seq
Ll_transcript_154597; FTRINITY_DN56586_c0_g2_i1 2446 2469 GGAGGAATTATTGCATGGTCTAAT BLAST Degradome_Seq
Ll_transcript_154618; FTRINITY_DN56586_c0_g2_i11 2613 2636 GGAGGAATTATTGCATGGTCTAAT BLAST Degradome_Seq
Ll_transcript_127342; FTRINITY_DN55656_c0_g1_i11 349 372 AGGGACATTGCCACCTGGTCTAAT BLAST Degradome_Seq
Ll_transcript_127332; FTRINITY_DN55656_c0_g1_i2 463 486 AGGGACATTGCCACCTGGTCTAAT BLAST Degradome_Seq
Ll_transcript_127335; FTRINITY_DN55656_c0_g1_i5 1326 1349 AGGGACATTGCCACCTGGTCTAAT BLAST Degradome_Seq
Ll_transcript_127340; FTRINITY_DN55656_c0_g1_i9 1452 1475 AGGGACATTGCCACCTGGTCTAAT BLAST Degradome_Seq
Ll_transcript_127331; FTRINITY_DN55656_c0_g1_i1 1556 1579 AGGGACATTGCCACCTGGTCTAAT BLAST Degradome_Seq
Ll_transcript_76494; FTRINITY_DN55560_c1_g1_i1 198 221 GATCAGGTTGTTATATGATTTAAT BLAST Degradome_Seq
Ll_transcript_127341; FTRINITY_DN55656_c0_g1_i10 2190 2213 AGGGACATTGCCACCTGGTCTAAT BLAST Degradome_Seq
Ll_transcript_32078; FTRINITY_DN58481_c1_g4_i1 202 226 TGTGCAAATTGTAACATGATCTAAA BLAST Degradome_Seq
Ll_transcript_32079; FTRINITY_DN58481_c1_g4_i2 202 226 TGTGCAAATTGTAACATGATCTAAA BLAST Degradome_Seq
Ll_transcript_115176; FTRINITY_DN59322_c2_g1_i2 809 832 TAGGGGGTTGCTGTATGATTTAAT BLAST Degradome_Seq
Ll_transcript_115192; FTRINITY_DN59322_c2_g1_i18 809 832 TAGGGGGTTGCTGTATGATTTAAT BLAST Degradome_Seq
Ll_transcript_454511; TRINITY_DN49726_c1_g1_i1 209 232 GCTCTAACTGCTATATGATCTGAT BLAST Degradome_Seq
Ll_transcript_488336; TRINITY_DN65118_c0_g1_i1 8 31 GCTTTAATTGTTACATGATCTAAT BLAST Degradome_Seq
Ll_transcript_456898; TRINITY_DN49983_c5_g2_i2 123 146 GCTCTAACTGCTATATGATCTGAT BLAST Degradome_Seq
Ll_transcript_375069; TRINITY_DN47702_c6_g1_i1 367 390 GATGGAACTGACACATGATTTGAT BLAST Degradome_Seq
Ll_transcript_439554; TRINITY_DN48399_c2_g1_i12 129 152 CTGTGAATTGCTGCATGATTTAAT BLAST Degradome_Seq
Ll_transcript_451501; TRINITY_DN50614_c1_g2_i1 219 242 ACTGAAACTGCCACATGGCTTAAT BLAST Degradome_Seq
Ll_transcript_324379; TRINITY_DN45381_c0_g1_i3 667 690 TATGTTGCTGTCATATGATCTAAT BLAST Degradome_Seq
Ll_transcript_324376; TRINITY_DN45381_c0_g1_i1 912 935 TATGTTGCTGTCATATGATCTAAT BLAST Degradome_Seq
Ll_transcript_324380; TRINITY_DN45381_c0_g1_i4 1027 1050 TATGTTGCTGTCATATGATCTAAT BLAST Degradome_Seq
Ll_transcript_324377; TRINITY_DN45381_c0_g1_i2 1201 1224 TATGTTGCTGTCATATGATCTAAT BLAST Degradome_Seq
Ll_transcript_351315; TRINITY_DN53925_c0_g1_i1 63 86 ATATTAACTGTTGCATGATTTGAT BLAST Degradome_Seq
Ll_transcript_469017; TRINITY_DN68634_c0_g1_i1 162 185 GCAGAAATTGTCATATTATCTAAT BLAST Degradome_Seq
Ll_transcript_469149; TRINITY_DN19031_c0_g1_i1 1154 1177 GATGGGGATGTTACATGATCTAAT BLAST Degradome_Seq
Ll_transcript_342260; TRINITY_DN49819_c5_g1_i7 459 482 GCTGAAACTGCCACCTCATCTGAT BLAST Degradome_Seq
Ll_transcript_342261; TRINITY_DN49819_c5_g1_i8 459 482 GCTGAAACTGCCACCTCATCTGAT BLAST Degradome_Seq
Ll_transcript_342254; TRINITY_DN49819_c5_g1_i1 459 482 GCTGAAACTGCCACCTCATCTGAT BLAST Degradome_Seq
Ll_transcript_370017; TRINITY_DN48630_c0_g1_i2 159 182 ATTGAAACTACCATGTGATTTGGT BLAST Degradome_Seq
Ll_transcript_370005; TRINITY_DN48630_c0_g1_i1 246 269 ATTGAAACTACCATGTGATTTGGT BLAST Degradome_Seq
Ll_transcript_279407; TRINITY_DN50104_c1_g1_i1 334 357 TTTGGGGCTGCTACATGTTTTAAT BLAST Degradome_Seq
Ll_transcript_304054; TRINITY_DN48295_c1_g1_i11 2915 2938 GGAGGAATTATTGCATGGTCTAAT BLAST Degradome_Seq
Ll_transcript_304046; TRINITY_DN48295_c1_g1_i4 3158 3181 GGAGGAATTATTGCATGGTCTAAT BLAST Degradome_Seq
Ll_transcript_304067; TRINITY_DN48295_c1_g1_i24 3379 3402 GGAGGAATTATTGCATGGTCTAAT BLAST Degradome_Seq
Ll_transcript_304057; TRINITY_DN48295_c1_g1_i14 3623 3646 GGAGGAATTATTGCATGGTCTAAT BLAST Degradome_Seq
Ll_transcript_304065; TRINITY_DN48295_c1_g1_i22 3866 3889 GGAGGAATTATTGCATGGTCTAAT BLAST Degradome_Seq
Ll_transcript_343756; TRINITY_DN49833_c0_g2_i1 453 476 AGGGACATTGCCACCTGGTCTAAT BLAST Degradome_Seq
Ll_transcript_343757; TRINITY_DN49833_c0_g1_i5 1239 1262 AGGGACATTGCCACCTGGTCTAAT BLAST Degradome_Seq
Ll_transcript_343753; TRINITY_DN49833_c0_g1_i2 1561 1584 AGGGACATTGCCACCTGGTCTAAT BLAST Degradome_Seq
Ll_transcript_343758; TRINITY_DN49833_c0_g1_i6 1559 1582 AGGGACATTGCCACCTGGTCTAAT BLAST Degradome_Seq
Ll_transcript_464121; TRINITY_DN52692_c6_g1_i13 176 200 TGTGCAAATTGTAACATGATCTAAA BLAST Degradome_Seq
Ll_transcript_464111; TRINITY_DN52692_c6_g1_i3 179 203 TGTGCAAATTGTAACATGATCTAAA BLAST Degradome_Seq
Ll_transcript_464113; TRINITY_DN52692_c6_g1_i5 251 275 TGTGCAAATTGTAACATGATCTAAA BLAST Degradome_Seq
Ll_transcript_464125; TRINITY_DN52692_c6_g1_i17 251 275 TGTGCAAATTGTAACATGATCTAAA BLAST Degradome_Seq
Ll_transcript_479460; TRINITY_DN52767_c1_g1_i25 850 873 TAGGGGGTTGCTGTATGATTTAAT BLAST Degradome_Seq

Expression of miRNA 483


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)